RNA–Protein interactions for RNA: ENST00000442240.5

SUCLG1-203, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 5

Gene SUCLG1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-203ENST00000442240 TSC2P49815 1807 aa12.52□□□□□ -0.41
SUCLG1-203ENST00000442240 ENPP3O14638 875 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 NBNO60934 754 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 HSF2BPO75031 334 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 PDGFRAP16234 1089 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 LMO2P25791 158 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 RFC1P35251 1148 aaPredicted RBP12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 PTPN9P43378 593 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 MARCKSL1P49006 195 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 VSNL1P62760 191 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 DR1Q01658 176 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 YWHAHQ04917 246 aaPredicted RBP12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 NNTQ13423 1086 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 TIGD5Q53EQ6 642 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 MDH1BQ5I0G3 518 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 INTS6LQ5JSJ4 861 aaKnown RBP12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 PMF1Q6P1K2 205 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 LLGL2Q6P1M3 1020 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 CNKSR3Q6P9H4 555 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 EMBQ6PCB8 327 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 HDXQ7Z353 690 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 FAM35AQ86V20 835 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 VSIG1Q86XK7 387 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 MAP7D3Q8IWC1 876 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 DCP1BQ8IZD4 617 aaKnown RBP12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 LRRC43Q8N309 656 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 TTC13Q8NBP0 860 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 LINC01599Q8WXQ3 324 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 PKNOX2Q96KN3 472 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 AP1M1Q9BXS5 423 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 TRIM7Q9C029 511 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 PNPLA8Q9NP80 782 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 FAM114A2Q9NRY5 505 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 TBC1D13Q9NVG8 400 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 RRN3Q9NYV6 651 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 SMARCAL1Q9NZC9 954 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 PCYOX1Q9UHG3 505 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 STAP1Q9ULZ2 295 aa12.51□□□□□ -0.41
SUCLG1-203ENST00000442240 C2CD4BA6NLJ0 364 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 PRPSAP2O60256 369 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 DAB1O75553 588 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 GAS8O95995 478 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 GJC1P36383 396 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 OR1G1P47890 313 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 GJA8P48165 433 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 RGS7P49802 495 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 RBM10P98175 930 aaKnown RBP12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 ZNF252P-AS1Q0IIN9 211 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 IKBKEQ14164 716 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 NFE2Q16621 373 aaPredicted RBP12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 BOLA3Q53S33 107 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 TFDP3Q5H9I0 405 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 CLLU1OSQ5K130 101 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 RTN4RL1Q86UN2 441 aaPredicted RBP12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 COLGALT2Q8IYK4 626 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 FUKQ8N0W3 1084 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 C3orf58Q8NDZ4 430 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 JOSD2Q8TAC2 188 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 TEKT4Q8WW24 435 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 SLCO2A1Q92959 643 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 MAGOHBQ96A72 148 aaKnown RBP12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 OSBPL8Q9BZF1 889 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 OSBPL7Q9BZF2 842 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 C11orf49Q9H6J7 331 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 LRRC19Q9H756 370 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 CNGB3Q9NQW8 809 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 GDF3Q9NR23 364 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 KRT82Q9NSB4 513 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 NME7Q9Y5B8 376 aa12.5□□□□□ -0.41
SUCLG1-203ENST00000442240 SF3B1O75533 1304 aaKnown RBP eCLIP12.49□□□□□ -0.416e-6■■■■■ 103.4
SUCLG1-203ENST00000442240 F8VP50 259 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 PAPSS1O43252 624 aaPredicted RBP12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 RAD51CO43502 376 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 LRCH4O75427 683 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 TADA2AO75478 443 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 AP1G2O75843 785 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 MYCP01106 439 aaPredicted RBP12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 CLTBP09497 229 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 ACAT1P24752 427 aaKnown RBP12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 RDXP35241 583 aaKnown RBP12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 TAS2R40P59535 323 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 C1QTNF8P60827 252 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 GUCY2DQ02846 1103 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 SLC25A11Q02978 314 aaKnown RBP12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 FAAP100Q0VG06 881 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 SMARCB1Q12824 385 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 PDK2Q15119 407 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 TRIM60Q495X7 471 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 CLEC20AQ6ZU45 233 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 STRADAQ7RTN6 431 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 PIGZQ86VD9 579 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 CCDC105Q8IYK2 499 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 SCML4Q8N228 414 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 RXFP2Q8WXD0 754 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 IRGQQ8WZA9 623 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 SLITRK1Q96PX8 696 aa12.49□□□□□ -0.41
SUCLG1-203ENST00000442240 DDX47Q9H0S4 455 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms