RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 TSHRP16473 764 aa17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 CCNG1P51959 295 aa17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 OSTNP61366 133 aa17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 RNASELQ05823 741 aaKnown RBP17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 BANPQ8N9N5 519 aa17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 FAM167AQ96KS9 214 aa17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 ZNF570Q96NI8 536 aa17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 IKBKGQ9Y6K9 419 aa17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 TRAFD1O14545 582 aaPredicted RBP17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 ABLIM1O14639 778 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 SARNPP82979 210 aaKnown RBP17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 MTDHQ86UE4 582 aaKnown RBP17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 LONP2Q86WA8 852 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 XYLT1Q86Y38 959 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 KIRREL3Q8IZU9 778 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 FAM13CQ8NE31 585 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 CMASQ8NFW8 434 aaPredicted RBP17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 HSPH1Q92598 858 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 KLF6Q99612 283 aaPredicted RBP17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 CALN1Q9BXU9 219 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 C2orf40Q9H1Z8 148 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 MANSC1Q9H8J5 431 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 RNPEPL1Q9HAU8 725 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 SLC5A4Q9NY91 659 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 POLIQ9UNA4 740 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 PPME1Q9Y570 386 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 IQANK1A0A1B0GTG1 560 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 B4GALT4O60513 344 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 RAP1GAPP47736 663 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 DPYSL3Q14195 570 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 ZNF667Q5HYK9 610 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 MPZL3Q6UWV2 235 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 ZNF276Q8N554 614 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 SPATA18Q8TC71 538 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 SAR1AQ9NR31 198 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 DCTN4Q9UJW0 460 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 CHMP2BQ9UQN3 213 aa17.26■□□□□ 0.35
SEMA3B-207ENST00000441915 GAS2O43903 313 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 HNRNPCL1O60812 293 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 MT-ND3P03897 115 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 CALB2P22676 271 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 MARK3P27448 753 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 PTPN4P29074 926 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 MIPP30301 263 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 PLEKHG4Q58EX7 1191 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 WDR78Q5VTH9 848 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 CLNKQ7Z7G1 428 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 LRRC71Q8N4P6 559 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 CAMKK2Q96RR4 588 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 RSAD1Q9HA92 442 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 SLC17A7Q9P2U7 560 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 USP18Q9UMW8 372 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 LPXNO60711 386 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 EPHB2P29323 1055 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 STIP1P31948 543 aaKnown RBP17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 ACAP1Q15027 740 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 METTL7BQ6UX53 244 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 TRIM55Q9BYV6 548 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 GJA3Q9Y6H8 435 aa17.25■□□□□ 0.35
SEMA3B-207ENST00000441915 UTRNP46939 3433 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 ERBB2P04626 1255 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 TGFB3P10600 412 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 HIRAP54198 1017 aaPredicted RBP17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 RAD23BP54727 409 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 CDH8P55286 799 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 OVGP1Q12889 678 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 ATF7IP2Q5U623 682 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 TSHZ1Q6ZSZ6 1077 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 BZW1Q7L1Q6 419 aaKnown RBP17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 ANKRD27Q96NW4 1050 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 C12orf65Q9H3J6 166 aaKnown RBP17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 LNPEPQ9UIQ6 1025 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 ELK3P41970 407 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 PTK7Q13308 1070 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 TAF5Q15542 800 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 KLRG1Q96E93 195 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 TSSK1BQ9BXA7 367 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 ASNSD1Q9NWL6 643 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 AFG3L2Q9Y4W6 797 aa17.24■□□□□ 0.35
SEMA3B-207ENST00000441915 A0A0G2JND7 137 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 E7ENQ6 273 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 INO80B-WBP1J3KQ70 363 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 PEX11AO75192 247 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 TRUB2O95900 331 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 INHBAP08476 426 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 PROZP22891 400 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 ROR1Q01973 937 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 ORC1Q13415 861 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 DARS2Q6PI48 645 aaKnown RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 STK32AQ8WU08 396 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 BCO2Q9BYV7 579 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 INO80BQ9C086 356 aaPredicted RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 NKX1-2Q9UD57 310 aaPredicted RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 TCRBV9S1A1TA0A576 114 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 ACKR2O00590 384 aa17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
SEMA3B-207ENST00000441915 NEFHP12036 1026 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms