RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 MAP3K13O43283 966 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 HCRTO43612 131 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 ATP2C2O75185 946 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 PDGFRBP09619 1106 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 TCF3P15923 654 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 PPP3CCP48454 512 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 CASP5P51878 434 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 CCDC142Q17RM4 750 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 FAM171BQ6P995 826 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 CCDC33Q8N5R6 958 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 USP33Q8TEY7 942 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 FAM84AQ96KN4 292 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 LINC00597Q9H2U6 94 aa21.31■■□□□ 1
UBE2F-215ENST00000441728 BCCIPQ9P287 314 aaKnown RBP eCLIP21.31■■□□□ 1
UBE2F-215ENST00000441728 FBXO2Q9UK22 296 aaPredicted RBP21.31■■□□□ 1
UBE2F-215ENST00000441728 MAP1BP46821 2468 aaKnown RBP21.3■■□□□ 1
UBE2F-215ENST00000441728 LEFTY2O00292 366 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 CENPBP07199 599 aaPredicted RBP21.3■■□□□ 1
UBE2F-215ENST00000441728 ZNF252P-AS1Q0IIN9 211 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 PMS2CLQ68D20 193 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 EZH1Q92800 747 aaPredicted RBP21.3■■□□□ 1
UBE2F-215ENST00000441728 CNOT6LQ96LI5 555 aaKnown RBP21.3■■□□□ 1
UBE2F-215ENST00000441728 CLIC6Q96NY7 704 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 SLITRK1Q96PX8 696 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 PANK2Q9BZ23 570 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 LRRC27Q9C0I9 530 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 KIAA1586Q9HCI6 787 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 POLMQ9NP87 494 aaPredicted RBP21.3■■□□□ 1
UBE2F-215ENST00000441728 SIX4Q9UIU6 781 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 MMP17Q9ULZ9 603 aa21.3■■□□□ 1
UBE2F-215ENST00000441728 APODP05090 189 aa21.29■■□□□ 1
UBE2F-215ENST00000441728 MRPS21P82921 87 aaKnown RBP21.29■■□□□ 1
UBE2F-215ENST00000441728 IFRD2Q12894 506 aaPredicted RBP21.29■■□□□ 1
UBE2F-215ENST00000441728 FOXC1Q12948 553 aa21.29■■□□□ 1
UBE2F-215ENST00000441728 UAP1L1Q3KQV9 507 aa21.29■■□□□ 1
UBE2F-215ENST00000441728 TDRD10Q5VZ19 366 aaKnown RBP21.29■■□□□ 1
UBE2F-215ENST00000441728 FILIP1Q7Z7B0 1213 aa21.29■■□□□ 1
UBE2F-215ENST00000441728 DDX42Q86XP3 938 aaKnown RBP eCLIP21.29■■□□□ 1
UBE2F-215ENST00000441728 PGBD3Q8N328 593 aa21.29■■□□□ 1
UBE2F-215ENST00000441728 PIGKQ92643 395 aa21.29■■□□□ 1
UBE2F-215ENST00000441728 FNBP1Q96RU3 617 aa21.29■■□□□ 1
UBE2F-215ENST00000441728 SMPD4Q9NXE4 827 aa21.29■■□□□ 1
UBE2F-215ENST00000441728 CPQQ9Y646 472 aa21.29■■□□□ 1
UBE2F-215ENST00000441728 KMT2BQ9UMN6 2715 aaPredicted RBP21.29■■□□□ 1
UBE2F-215ENST00000441728 CNOT1A5YKK6 2376 aaKnown RBP21.29■■□□□ 1
UBE2F-215ENST00000441728 LNP1A1A4G5 178 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 ADH1CP00326 375 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 TNNI1P19237 187 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 WARSP23381 471 aaKnown RBP21.28■■□□□ 1
UBE2F-215ENST00000441728 LMO2P25791 158 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 TNNC1P63316 161 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 RESTQ13127 1097 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 BYSLQ13895 437 aaKnown RBP21.28■■□□□ 1
UBE2F-215ENST00000441728 MDH1BQ5I0G3 518 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 SH3PXD2AQ5TCZ1 1133 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 LPCAT2Q7L5N7 544 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 OR5B17Q8NGF7 314 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 OR6B3Q8NGW1 331 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 PNKPQ96T60 521 aa21.28■■□□□ 1
UBE2F-215ENST00000441728 NUSAP1Q9BXS6 441 aaKnown RBP21.28■■□□□ 1
UBE2F-215ENST00000441728 K7EQS6 105 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 MBL2P11226 248 aaPredicted RBP21.27■■□□□ 1
UBE2F-215ENST00000441728 GNL1P36915 607 aaPredicted RBP21.27■■□□□ 1
UBE2F-215ENST00000441728 OPRD1P41143 372 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 CRY1Q16526 586 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 EOGTQ5NDL2 527 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 WDR49Q8IV35 697 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 PDILTQ8N807 584 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 MDGA1Q8NFP4 955 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 CXorf38Q8TB03 319 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 MYCBPAPQ8TBZ2 947 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 WHAMMQ8TF30 809 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 KBTBD7Q8WVZ9 684 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 PCED1BQ96HM7 432 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 CRTAC1Q9NQ79 661 aa21.27■■□□□ 1
UBE2F-215ENST00000441728 HELZP42694 1942 aaKnown RBP21.27■■□□□ 1
UBE2F-215ENST00000441728 ANAPC1Q9H1A4 1944 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.26■□□□□ 0.99
UBE2F-215ENST00000441728 F8VP50 259 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 CYP17A1P05093 508 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 PROS1P07225 676 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 DLATP10515 647 aaKnown RBP21.26■□□□□ 0.99
UBE2F-215ENST00000441728 TIE1P35590 1138 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 SLC7A9P82251 487 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 LMAN2Q12907 356 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 DHCR24Q15392 516 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 HSF5Q4G112 596 aaPredicted RBP21.26■□□□□ 0.99
UBE2F-215ENST00000441728 BTBD8Q5XKL5 378 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 NUDT18Q6ZVK8 323 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 RASSF3Q86WH2 238 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 CBWD2Q8IUF1 395 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 KIAA1958Q8N8K9 716 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 ELOVL4Q9GZR5 314 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 ARHGEF4Q9NR80 690 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 HSPBP1Q9NZL4 362 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 CFAP97Q9P2B7 532 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 TBC1D14Q9P2M4 693 aa21.26■□□□□ 0.99
UBE2F-215ENST00000441728 THADAQ6YHU6 1953 aa21.25■□□□□ 0.99
UBE2F-215ENST00000441728 FRMD3A2A2Y4 597 aa21.25■□□□□ 0.99
UBE2F-215ENST00000441728 ZNF840PA6NDX5 716 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms