RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 PHTF2Q8N3S3 785 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 USHBP1Q8N6Y0 703 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 LPCAT1Q8NF37 534 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 DDX1Q92499 740 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 HTRA1Q92743 480 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 SLC22A18Q96BI1 424 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 ACO2Q99798 780 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 TBCDQ9BTW9 1192 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 TMEM120AQ9BXJ8 343 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 SENP6Q9GZR1 1112 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 CARD9Q9H257 536 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 SARS2Q9NP81 518 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 CACNA1FO60840 1977 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 PI4KAP2A4QPH2 592 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 H7BY64 318 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 PEX1O43933 1283 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 ALDH18A1P54886 795 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 TRA2BP62995 288 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 TAP2Q03519 686 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 CAMK2DQ13557 499 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 EML3Q32P44 896 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 GKAP1Q5VSY0 366 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 TSEN2Q8NCE0 465 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 ZBTB34Q8NCN2 500 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 POC1BQ8TC44 478 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 GANCQ8TET4 914 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 WASF1Q92558 559 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 HSPBAP1Q96EW2 488 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 OSBPL9Q96SU4 736 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 MEIS3Q99687 375 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 TRIM2Q9C040 744 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 DRC3Q9H069 523 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 DDX4Q9NQI0 724 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 DTNAQ9Y4J8 743 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 ADGRG1Q9Y653 693 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 ARFGEF2Q9Y6D5 1785 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 SYCE3A1L190 88 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 F5H0A9 414 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 RECQL4O94761 1208 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 FGF4P08620 206 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 ACAA2P42765 397 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 INAVAQ3KP66 663 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 RCSD1Q6JBY9 416 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 G2E3Q7L622 706 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 PTRH1Q86Y79 214 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 GRIN3AQ8TCU5 1115 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 CERS4Q9HA82 394 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 DNAJB9Q9UBS3 223 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 TMCC1O94876 653 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 CYP1A1P04798 512 aaPredicted RBP11.04□□□□□ -0.64
SYNE2-206ENST00000441438 TNFSF4P23510 183 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 PDIA3P30101 505 aaKnown RBP11.04□□□□□ -0.64
SYNE2-206ENST00000441438 TRAF7Q6Q0C0 670 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 FBXO18Q8NFZ0 1043 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 PIGOQ8TEQ8 1089 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 GRK7Q8WTQ7 553 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 SLC9A6Q92581 669 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 EDC3Q96F86 508 aaKnown RBP11.04□□□□□ -0.64
SYNE2-206ENST00000441438 C12orf10Q9HB07 376 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 SPACA1Q9HBV2 294 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 KRT84Q9NSB2 600 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 NRXN2Q9P2S2 1712 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 PPEF2O14830 753 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 ATP5HO75947 161 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 TSPAN9O75954 239 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 NR3C2P08235 984 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 QDPRP09417 244 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 NKX3-2P78367 333 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 ABATP80404 500 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 BLMHQ13867 455 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 CHRNA2Q15822 529 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 CYB5D1Q6P9G0 228 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 CMTR2Q8IYT2 770 aaKnown RBP11.04□□□□□ -0.64
SYNE2-206ENST00000441438 DNAAF3Q8N9W5 541 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 CNOT6LQ96LI5 555 aaKnown RBP11.04□□□□□ -0.64
SYNE2-206ENST00000441438 PPP1R10Q96QC0 940 aaKnown RBP11.04□□□□□ -0.64
SYNE2-206ENST00000441438 PKP4Q99569 1192 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 SNTG1Q9NSN8 517 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.04□□□□□ -0.64
SYNE2-206ENST00000441438 COX16Q9P0S2 106 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 ZBTB1Q9Y2K1 713 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 USP16Q9Y5T5 823 aa11.04□□□□□ -0.64
SYNE2-206ENST00000441438 A0A0U1RQK1 487 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 ZNF320A2RRD8 509 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 LILRB5O75023 590 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 SRGAP2CP0DJJ0 459 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 S100A1P23297 94 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 MLH1P40692 756 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 GUCA2AQ02747 115 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 BFSP1Q12934 665 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 ITGB3BPQ13352 177 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 E2F2Q14209 437 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 LONRF2Q1L5Z9 754 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 PPP6R3Q5H9R7 873 aaPredicted RBP11.03□□□□□ -0.64
SYNE2-206ENST00000441438 WDR93Q6P2C0 686 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 ETNPPLQ8TBG4 499 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 STARD8Q92502 1023 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 PRRX2Q99811 253 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 C1orf232A0A0U1RR37 186 aa11.03□□□□□ -0.64
SYNE2-206ENST00000441438 H0YAE9 185 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms