RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 FAM200BP0CF97 657 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 MAP3K7CLP57077 242 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 GCNT1Q02742 428 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 VWA3BQ502W6 1294 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 PPP1R26Q5T8A7 1209 aaPredicted RBP19.12■□□□□ 0.65
CPSF4-205ENST00000440514 CLEC20AQ6ZU45 233 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 GPIHBP1Q8IV16 184 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 SLC44A3Q8N4M1 653 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 EDAQ92838 391 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 SMARCD2Q92925 531 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 CEP295NLQ96MC4 621 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 FUCA2Q9BTY2 467 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 DNAI2Q9GZS0 605 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 DUSP12Q9UNI6 340 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 PCDHB4Q9Y5E5 795 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 MYH10P35580 1976 aa19.12■□□□□ 0.65
CPSF4-205ENST00000440514 GTPBP10A4D1E9 387 aaKnown RBP19.11■□□□□ 0.65
CPSF4-205ENST00000440514 PES1O00541 588 aaKnown RBP19.11■□□□□ 0.65
CPSF4-205ENST00000440514 PRAMEF12O95522 483 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 CALCAP01258 141 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 CD19P15391 556 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 VIPR2P41587 438 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 SLC5A3P53794 718 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 NCAPHQ15003 741 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 EXOC3L4Q17RC7 722 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 TANGO2Q6ICL3 276 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 TMEM270Q6UE05 265 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 NXPE3Q969Y0 559 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 TTLL2Q9BWV7 592 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 PLA2G2FQ9BZM2 168 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 CSNK1G1Q9HCP0 422 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 C11orf16Q9NQ32 467 aa19.11■□□□□ 0.65
CPSF4-205ENST00000440514 ZNF638Q14966 1978 aaKnown RBP19.11■□□□□ 0.65
CPSF4-205ENST00000440514 TNFRSF10BO14763 440 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 ECI2O75521 394 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 PON1P27169 355 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 KRT31Q15323 416 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 GOLGA7BQ2TAP0 167 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 TXNDC8Q6A555 127 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 GPRIN1Q7Z2K8 1008 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 UBALD2Q8IYN6 164 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 NUP93Q8N1F7 819 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 RBBP8NLQ8NC74 664 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-205ENST00000440514 MRPS31Q92665 395 aaKnown RBP19.1■□□□□ 0.65
CPSF4-205ENST00000440514 RSPRY1Q96DX4 576 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 SLC46A2Q9BY10 475 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 GPR88Q9GZN0 384 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 SMG9Q9H0W8 520 aaKnown RBP19.1■□□□□ 0.65
CPSF4-205ENST00000440514 HSD3B7Q9H2F3 369 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 TASP1Q9H6P5 420 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 TRPC7Q9HCX4 862 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 SIX2Q9NPC8 291 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 UBE2TQ9NPD8 197 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-205ENST00000440514 AJAP1Q9UKB5 411 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-205ENST00000440514 ANAPC1Q9H1A4 1944 aa19.1■□□□□ 0.65
CPSF4-205ENST00000440514 TECTAO75443 2155 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 RNF225M0QZC1 329 aaPredicted RBP19.09■□□□□ 0.65
CPSF4-205ENST00000440514 NPR3P17342 541 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 SIGLEC14Q08ET2 396 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 GRM2Q14416 872 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 ARHGAP17Q68EM7 881 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 TRIM67Q6ZTA4 783 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 MAB21L3Q8N8X9 362 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 SCAMP5Q8TAC9 235 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 ELSPBP1Q96BH3 223 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 NAT10Q9H0A0 1025 aaKnown RBP19.09■□□□□ 0.65
CPSF4-205ENST00000440514 VPS16Q9H269 839 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 ZFP14Q9HCL3 533 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 APEX2Q9UBZ4 518 aa19.09■□□□□ 0.65
CPSF4-205ENST00000440514 HHLA1C9JL84 531 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 RTN3O95197 1032 aaPredicted RBP19.08■□□□□ 0.64
CPSF4-205ENST00000440514 CFHP08603 1231 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 SRFP11831 508 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 KRT5P13647 590 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 YWHAQP27348 245 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 ZNF132P52740 706 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 TAF10Q12962 218 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 SGO2Q562F6 1265 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 VITQ6UXI7 678 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 TTC30AQ86WT1 665 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 ARID3BQ8IVW6 561 aaPredicted RBP19.08■□□□□ 0.64
CPSF4-205ENST00000440514 TFAP2BQ92481 460 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 FBXO32Q969P5 355 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 TRPV4Q9HBA0 871 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 EHD2Q9NZN4 543 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 TSPAN16Q9UKR8 245 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 COL4A3Q01955 1670 aa19.08■□□□□ 0.64
CPSF4-205ENST00000440514 C2orf78A6NCI8 922 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 TMEM221A6NGB7 291 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 M0R296 226 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 O00370 1275 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 PAEPP09466 180 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 VDRP11473 427 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 ZNF18P17022 549 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 BRD2P25440 801 aaKnown RBP19.07■□□□□ 0.64
CPSF4-205ENST00000440514 DDX6P26196 483 aaKnown RBP eCLIP19.07■□□□□ 0.64
CPSF4-205ENST00000440514 MFAP3P55082 362 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 GPC5P78333 572 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 KCNMA1Q12791 1236 aa19.07■□□□□ 0.64
CPSF4-205ENST00000440514 ARHGAP44Q17R89 818 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms