RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 POLNQ7Z5Q5 900 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 UNC45BQ8IWX7 931 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 FAM81AQ8TBF8 368 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 ZNF606Q8WXB4 792 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 DDX1Q92499 740 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 PPP2R3CQ969Q6 453 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 TARS2Q9BW92 718 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 ACSS3Q9H6R3 686 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 LNPEPQ9UIQ6 1025 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 APPL1Q9UKG1 709 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 ARAP2Q8WZ64 1704 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 HNRNPRO43390 633 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 DNAJC6O75061 913 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 CLUHO75153 1309 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 KRT38O76015 456 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 SNRPAP09012 282 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 POLR2BP30876 1174 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 NOVP48745 357 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 RPL10AP62906 217 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 GCNT1Q02742 428 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 CDC16Q13042 620 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 TKFCQ3LXA3 575 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 UMODL1Q5DID0 1318 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 EFHC1Q5JVL4 640 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 HHIPL2Q6UWX4 724 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 NPNTQ6UXI9 565 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 RAPH1Q70E73 1250 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 MYPNQ86TC9 1320 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 SIAH1Q8IUQ4 282 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 GDPD5Q8WTR4 605 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 CPT1BQ92523 772 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 CNBD2Q96M20 576 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 UBE2OQ9C0C9 1292 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 NGRNQ9NPE2 291 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 DMAP1Q9NPF5 467 aaPredicted RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 PIH1D1Q9NWS0 290 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 FAM198AQ9UFP1 575 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 ANKRD36CQ5JPF3 1778 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 TCRBV9S1A1TA0A576 114 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 SMAPO00193 183 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 DGKIO75912 1065 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 VIL1P09327 827 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 SCNN1BP51168 640 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 JAG1P78504 1218 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 KLF1Q13351 362 aaPredicted RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 WDR72Q3MJ13 1102 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 EFHC2Q5JST6 749 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 MARK2Q7KZI7 788 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 MON1BQ7L1V2 547 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 TMEM161BQ8NDZ6 487 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 OR6Y1Q8NGX8 325 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 ZNF398Q8TD17 642 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 CRYGNQ8WXF5 182 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 ATP2A3Q93084 1043 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 LRGUKQ96M69 825 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 TRIM56Q9BRZ2 755 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 ZNF341Q9BYN7 854 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 PHACTR1Q9C0D0 580 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 FAM192AQ9GZU8 254 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 KRT82Q9NSB4 513 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 DDX56Q9NY93 547 aaKnown RBP9.44□□□□□ -0.9
COPB1-202ENST00000439561 DNAJC16Q9Y2G8 782 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 NUMBLQ9Y6R0 609 aa9.44□□□□□ -0.9
COPB1-202ENST00000439561 hCG_1818297A0A087WSY0 165 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 NOP56O00567 594 aaKnown RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 AIM2O14862 343 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 HNRNPCP07910 306 aaKnown RBP eCLIP9.43□□□□□ -0.92e-7■■■□□ 15.2
COPB1-202ENST00000439561 TMEM191BP0C7N4 346 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 RARBP10826 455 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 TCN1P20061 433 aaPredicted RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 KCNA4P22459 653 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 INHBEP58166 350 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 CNGA3Q16281 694 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 SH2D4BQ5SQS7 431 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 TDRD10Q5VZ19 366 aaKnown RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 ZNF677Q86XU0 584 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 TREML1Q86YW5 311 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 DEFB107AQ8IZN7 70 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.43□□□□□ -0.9
COPB1-202ENST00000439561 KCTD17Q8N5Z5 321 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 RNF148Q8N7C7 305 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 BANPQ8N9N5 519 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 ATP6V0A1Q93050 837 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 TAAR1Q96RJ0 339 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 PPCSQ9HAB8 311 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 ANLNQ9NQW6 1124 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 SLC7A8Q9UHI5 535 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 FAF1Q9UNN5 650 aaPredicted RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 RPL26L1Q9UNX3 145 aaKnown RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 NEMP1O14524 444 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 LYPLA1O75608 230 aaPredicted RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 TMEM63AO94886 807 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 KRT7P08729 469 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 COPAP53621 1224 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 RALGPS1Q5JS13 557 aa9.43□□□□□ -0.9
COPB1-202ENST00000439561 RC3H1Q5TC82 1133 aaKnown RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 TTC39BQ5VTQ0 682 aaPredicted RBP9.43□□□□□ -0.9
COPB1-202ENST00000439561 CIAPIN1Q6FI81 312 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms