RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 NBNO60934 754 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 NDST3O95803 873 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 CHEK2O96017 543 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 ANXA2P07355 339 aaKnown RBP4.23□□□□□ -1.73
VPS41-207ENST00000439468 CHRM2P08172 466 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 BTF3P20290 206 aaKnown RBP4.23□□□□□ -1.73
VPS41-207ENST00000439468 FOLR3P41439 243 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 ANXA11P50995 505 aaKnown RBP4.23□□□□□ -1.73
VPS41-207ENST00000439468 ELLP55199 621 aaPredicted RBP4.23□□□□□ -1.73
VPS41-207ENST00000439468 POU6F2P78424 691 aaPredicted RBP4.23□□□□□ -1.73
VPS41-207ENST00000439468 TCF15Q12870 199 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 MPEG1Q2M385 716 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 SLC35G1Q2M3R5 365 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 LONRF3Q496Y0 759 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 PLA1AQ53H76 456 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 KAZNQ674X7 775 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 ERAP2Q6P179 960 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 SYCE2Q6PIF2 218 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 CCDC174Q6PII3 467 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 TSHZ1Q6ZSZ6 1077 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 RNF44Q7L0R7 432 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 SMC5Q8IY18 1101 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 ADGRG5Q8IZF4 528 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.23□□□□□ -1.73
VPS41-207ENST00000439468 TFAP2BQ92481 460 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 DDX17Q92841 729 aaKnown RBP4.23□□□□□ -1.73
VPS41-207ENST00000439468 ZNF566Q969W8 418 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 SPSB4Q96A44 273 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 MESP1Q9BRJ9 268 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 MYO1AQ9UBC5 1043 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 RAD54BQ9Y620 910 aa4.23□□□□□ -1.73
VPS41-207ENST00000439468 A0A087WZ62 844 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 MBD3L4A6NDZ8 208 aaPredicted RBP4.22□□□□□ -1.73
VPS41-207ENST00000439468 MBD3L3A6NE82 208 aaPredicted RBP4.22□□□□□ -1.73
VPS41-207ENST00000439468 PLEKHD1A6NEE1 506 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 FOXN3O00409 490 aaPredicted RBP4.22□□□□□ -1.73
VPS41-207ENST00000439468 IFRD1O00458 451 aaPredicted RBP4.22□□□□□ -1.73
VPS41-207ENST00000439468 C1RP00736 705 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 TXNP10599 105 aaKnown RBP4.22□□□□□ -1.73
VPS41-207ENST00000439468 MYL4P12829 197 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 PPP3CBP16298 524 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 GATA3P23771 443 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 NPTX2P47972 431 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 GCLCP48506 637 aaPredicted RBP4.22□□□□□ -1.73
VPS41-207ENST00000439468 HSPA7P48741 367 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 RARRES1P49788 294 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 SP2Q02086 613 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 DYRK1AQ13627 763 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 IQCB1Q15051 598 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 PTCHD3Q3KNS1 767 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 GRAMD1BQ3KR37 738 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 SLC44A4Q53GD3 710 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 DGKKQ5KSL6 1271 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 GORABQ5T7V8 394 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 TMEM108Q6UXF1 575 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 USP49Q70CQ1 688 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 TMPRSS9Q7Z410 1059 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 PEG10Q86TG7 708 aaKnown RBP4.22□□□□□ -1.73
VPS41-207ENST00000439468 ZNF384Q8TF68 577 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 BRI3BPQ8WY22 251 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 LPIN2Q92539 896 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 IQCDQ96DY2 449 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 PRDM13Q9H4Q3 707 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 MYH16Q9H6N6 1097 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 ARFGAP3Q9NP61 516 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 IL17RBQ9NRM6 502 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 ADARB2Q9NS39 739 aaKnown RBP4.22□□□□□ -1.73
VPS41-207ENST00000439468 ASB6Q9NWX5 421 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 FOXJ2Q9P0K8 574 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 SLC17A6Q9P2U8 582 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 ZNF212Q9UDV6 495 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 COX11Q9Y6N1 276 aa4.22□□□□□ -1.73
VPS41-207ENST00000439468 A0A087WV62 115 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 F5H697 171 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 TCEA3O75764 348 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 IGLV2-14P01704 120 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 A1BGP04217 495 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 ERBB2P04626 1255 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 SRGNP10124 158 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 EEF1GP26641 437 aaKnown RBP4.21□□□□□ -1.74
VPS41-207ENST00000439468 KLRC1P26715 233 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 CACNA2D1P54289 1103 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 DHX8Q14562 1220 aaKnown RBP4.21□□□□□ -1.74
VPS41-207ENST00000439468 KCNAB1Q14722 419 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 CCDC142Q17RM4 750 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 VPS53Q5VIR6 699 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 VWA1Q6PCB0 445 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 MICALCLQ6ZW33 695 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 GRASPQ7Z6J2 395 aaPredicted RBP4.21□□□□□ -1.74
VPS41-207ENST00000439468 SYTL1Q8IYJ3 562 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 VGLL2Q8N8G2 317 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 ENAHQ8N8S7 591 aaPredicted RBP4.21□□□□□ -1.74
VPS41-207ENST00000439468 MYCBPAPQ8TBZ2 947 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 PDLIM2Q96JY6 352 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 GDF15Q99988 308 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 TPSD1Q9BZJ3 242 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 SIK2Q9H0K1 926 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 KLK15Q9H2R5 256 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 PADI4Q9UM07 663 aa4.21□□□□□ -1.74
VPS41-207ENST00000439468 LRCH1Q9Y2L9 728 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms