RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 HIPK4Q8NE63 616 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 ACAP3Q96P50 834 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 SHCBP1LQ9BZQ2 653 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 FOXP3Q9BZS1 431 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 PCDHB4Q9Y5E5 795 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 COL2A1P02458 1487 aaPredicted RBP14.17□□□□□ -0.14
PCNX3-202ENST00000439247 DNAJC6O75061 913 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 GNA15P30679 374 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 KBTBD12Q3ZCT8 623 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 LIN9Q5TKA1 542 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 KCTD17Q8N5Z5 321 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 FEZF2Q8TBJ5 459 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 CCDC110Q8TBZ0 833 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 FAM81BQ96LP2 452 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 MXRA8Q9BRK3 442 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 C20orf27Q9GZN8 174 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 ACSS3Q9H6R3 686 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 APOBEC3GQ9HC16 384 aaKnown RBP14.17□□□□□ -0.14
PCNX3-202ENST00000439247 ETNK2Q9NVF9 386 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 FARP1Q9Y4F1 1045 aaPredicted RBP14.17□□□□□ -0.14
PCNX3-202ENST00000439247 ACOT2P49753 483 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 LMNB2Q03252 620 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 ZRSR2Q15696 482 aaKnown RBP14.17□□□□□ -0.14
PCNX3-202ENST00000439247 LIN52Q52LA3 116 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 ZNF394Q53GI3 561 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 PRPF39Q86UA1 669 aaKnown RBP14.17□□□□□ -0.14
PCNX3-202ENST00000439247 ATP11CQ8NB49 1132 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 ACTL9Q8TC94 416 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 SMYD3Q9H7B4 428 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 ZWILCHQ9H900 591 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 DMAP1Q9NPF5 467 aaPredicted RBP14.17□□□□□ -0.14
PCNX3-202ENST00000439247 NDE1Q9NXR1 346 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 PLA2G4CQ9UP65 541 aa14.17□□□□□ -0.14
PCNX3-202ENST00000439247 hCG_2014768A0A024R1R8 64 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 hCG_1818297A0A087WSY0 165 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 PRR5-ARHGAP8B1AHC4 643 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 PMM2O15305 246 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 TM9SF1O15321 606 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 OPHN1O60890 802 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 HARSP12081 509 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 TNNI1P19237 187 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 RPL22P35268 128 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 NCKAP1LP55160 1127 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 ARHGAP8P85298 464 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 OTUD4Q01804 1114 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 GCNT1Q02742 428 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 KRT72Q14CN4 511 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 SFT2D3Q587I9 215 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 BRDTQ58F21 947 aaPredicted RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 PLEKHA7Q6IQ23 1121 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 ZCCHC23Q6ZST2 131 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 UNC45BQ8IWX7 931 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 RCOR2Q8IZ40 523 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 BICD1Q96G01 975 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 AGBL1Q96MI9 1066 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 SENP7Q9BQF6 1050 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 EBF4Q9BQW3 602 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 DHRS4Q9BTZ2 278 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 GLIS2Q9BZE0 524 aaPredicted RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 SLC13A1Q9BZW2 595 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 DDX43Q9NXZ2 648 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 HERC5Q9UII4 1024 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 SHOC2Q9UQ13 582 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 CAPN14A8MX76 684 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 HNRNPDLO14979 420 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 HLA-DRAP01903 254 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 CD48P09326 243 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 QARSP47897 775 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 INHBCP55103 352 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 BASP1P80723 227 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 SEZ6Q53EL9 994 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 LRRC23Q53EV4 343 aaPredicted RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 CYP4A22Q5TCH4 519 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 POU5F2Q8N7G0 328 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 FAM81AQ8TBF8 368 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 NMD3Q96D46 503 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 DNAJC1Q96KC8 554 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 MFSD14AQ96MC6 490 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 TRIM56Q9BRZ2 755 aaKnown RBP14.16□□□□□ -0.14
PCNX3-202ENST00000439247 ANGPTL2Q9UKU9 493 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 TELO2Q9Y4R8 837 aa14.16□□□□□ -0.14
PCNX3-202ENST00000439247 ITGBL1O95965 494 aaPredicted RBP14.15□□□□□ -0.14
PCNX3-202ENST00000439247 DHRS4L1P0CG22 281 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 ACO1P21399 889 aaKnown RBP14.15□□□□□ -0.14
PCNX3-202ENST00000439247 ELK3P41970 407 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 SCNN1BP51168 640 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 RAP1GDS1P52306 607 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 IRX4P78413 519 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 SLC25A3Q00325 362 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 PDE1BQ01064 536 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 BST1Q10588 318 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 TDRD10Q5VZ19 366 aaKnown RBP14.15□□□□□ -0.14
PCNX3-202ENST00000439247 SATL1Q86VE3 508 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 MYLK4Q86YV6 388 aaPredicted RBP14.15□□□□□ -0.14
PCNX3-202ENST00000439247 ABRAQ8N0Z2 381 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 NAT8LQ8N9F0 302 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 LRRN4Q8WUT4 740 aa14.15□□□□□ -0.14
PCNX3-202ENST00000439247 XPO7Q9UIA9 1087 aaKnown RBP14.15□□□□□ -0.14
PCNX3-202ENST00000439247 SNCAIPQ9Y6H5 919 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms