RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 DENND5BQ6ZUT9 1274 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 CMTM8Q8IZV2 173 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 FBXL6Q8N531 539 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 TMEM105Q8N8V8 129 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 USP13Q92995 863 aaPredicted RBP14.09□□□□□ -0.15
LINC00399-201ENST00000439008 HNRNPABQ99729 332 aaKnown RBP14.09□□□□□ -0.15
LINC00399-201ENST00000439008 MED10Q9BTT4 135 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 CSNK1G1Q9HCP0 422 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 KRT82Q9NSB4 513 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 IL37Q9NZH6 218 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 GCNT4Q9P109 453 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 WNT16Q9UBV4 365 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 HELZP42694 1942 aaKnown RBP14.09□□□□□ -0.15
LINC00399-201ENST00000439008 CACNA1HO95180 2353 aa14.09□□□□□ -0.15
LINC00399-201ENST00000439008 TRIM66O15016 1216 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 FGF19O95750 216 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 GNA14O95837 355 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 MAP3K7CLP57077 242 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 WDR44Q5JSH3 913 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 PHLDB3Q6NSJ2 640 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 CLEC20AQ6ZU45 233 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 C11orf57Q6ZUT1 292 aaPredicted RBP14.08□□□□□ -0.16
LINC00399-201ENST00000439008 RRAGAQ7L523 313 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 MON1AQ86VX9 555 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 MFSD6LQ8IWD5 586 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 EHBP1Q8NDI1 1231 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 CYFIP2Q96F07 1278 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 SMARCD1Q96GM5 515 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 FAXDC2Q96IV6 333 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 ZFYVE19Q96K21 471 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 KREMEN1Q96MU8 473 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 ZSWIM1Q9BR11 485 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 GPR88Q9GZN0 384 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 SAMSN1Q9NSI8 373 aaKnown RBP14.08□□□□□ -0.16
LINC00399-201ENST00000439008 FBXL21Q9UKT6 434 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.08□□□□□ -0.16
LINC00399-201ENST00000439008 MYO16Q9Y6X6 1858 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 VPS13AQ96RL7 3174 aa14.08□□□□□ -0.16
LINC00399-201ENST00000439008 AFPP02771 609 aaKnown RBP14.07□□□□□ -0.16
LINC00399-201ENST00000439008 PSMC3P17980 439 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 CD72P21854 359 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 ERCC5P28715 1186 aaPredicted RBP14.07□□□□□ -0.16
LINC00399-201ENST00000439008 WEE1P30291 646 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 GDI1P31150 447 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 SLC5A3P53794 718 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 IFRD2Q12894 506 aaPredicted RBP14.07□□□□□ -0.16
LINC00399-201ENST00000439008 TAF10Q12962 218 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 ARHGAP15Q53QZ3 475 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 MIIPQ5JXC2 388 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 DPY19L2P1Q6NXN4 242 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 GJB7Q6PEY0 223 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 NUP93Q8N1F7 819 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 CCDC150Q8NCX0 1101 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 TFAP2BQ92481 460 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 TMEM176AQ96HP8 235 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 CRACR2AQ9BSW2 395 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 RNF38Q9H0F5 515 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 INTS2Q9H0H0 1204 aaKnown RBP14.07□□□□□ -0.16
LINC00399-201ENST00000439008 DMAP1Q9NPF5 467 aaPredicted RBP14.07□□□□□ -0.16
LINC00399-201ENST00000439008 ARHGEF3Q9NR81 526 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 HEBP1Q9NRV9 189 aa14.07□□□□□ -0.16
LINC00399-201ENST00000439008 UXTQ9UBK9 157 aaPredicted RBP14.07□□□□□ -0.16
LINC00399-201ENST00000439008 MTF2Q9Y483 593 aaPredicted RBP14.07□□□□□ -0.16
LINC00399-201ENST00000439008 FAM92AA1XBS5 289 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 ZNF840PA6NDX5 716 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 TULP2O00295 520 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 P4HA2O15460 535 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 CCDC192P0DO97 292 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 SLC9A1P19634 815 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 ANXA13P27216 316 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 AVPR2P30518 371 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 FCHO2Q0JRZ9 810 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 SLC44A4Q53GD3 710 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 TTC30AQ86WT1 665 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 CREBRFQ8IUR6 639 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 ARL14EPQ8N8R7 260 aaPredicted RBP14.06□□□□□ -0.16
LINC00399-201ENST00000439008 MRPS31Q92665 395 aaKnown RBP14.06□□□□□ -0.16
LINC00399-201ENST00000439008 JAKMIP2Q96AA8 810 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 CEP295NLQ96MC4 621 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 HEXIM2Q96MH2 286 aaKnown RBP14.06□□□□□ -0.16
LINC00399-201ENST00000439008 NT5C1BQ96P26 610 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 GCNAQ96QF7 691 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 DDX23Q9BUQ8 820 aaKnown RBP14.06□□□□□ -0.16
LINC00399-201ENST00000439008 TRMT61BQ9BVS5 477 aaKnown RBP14.06□□□□□ -0.16
LINC00399-201ENST00000439008 FOXQ1Q9C009 403 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 THAP9Q9H5L6 903 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 TBC1D17Q9HA65 648 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 TRPC7Q9HCX4 862 aa14.06□□□□□ -0.16
LINC00399-201ENST00000439008 CHORDC1Q9UHD1 332 aaPredicted RBP14.06□□□□□ -0.16
LINC00399-201ENST00000439008 AJAP1Q9UKB5 411 aaPredicted RBP14.06□□□□□ -0.16
LINC00399-201ENST00000439008 CACNA1IQ9P0X4 2223 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 OTOL1A6NHN0 477 aaPredicted RBP14.05□□□□□ -0.16
LINC00399-201ENST00000439008 GOLGA6L22H0YM25 854 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 FAM200BP0CF97 657 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 GLULP15104 373 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 STARD6P59095 220 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 TNK2Q07912 1038 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 ASTLQ6HA08 431 aaPredicted RBP14.05□□□□□ -0.16
LINC00399-201ENST00000439008 ZNF687Q8N1G0 1237 aa14.05□□□□□ -0.16
LINC00399-201ENST00000439008 PPM1KQ8N3J5 372 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms