RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 GRK3P35626 688 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 MSH2P43246 934 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 MTNR1BP49286 362 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 RNASE9P60153 205 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 ARF3P61204 181 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 VAMP2P63027 116 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 CCT2P78371 535 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 ARF1P84077 181 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 KIF23Q02241 960 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 CALD1Q05682 793 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 TFCP2Q12800 502 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 EIF2B5Q13144 721 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 HNRNPA0Q13151 305 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 PTK2BQ14289 1009 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 TMEM177Q53S58 311 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 ODF2Q5BJF6 829 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 C1orf141Q5JVX7 400 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 STYK1Q6J9G0 422 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 PPP1R42Q7Z4L9 355 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 HERC6Q8IVU3 1022 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 CCDC33Q8N5R6 958 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 EFHBQ8N7U6 833 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 DENND1AQ8TEH3 1009 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 SMCR8Q8TEV9 937 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 TGFBRAP1Q8WUH2 860 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 RIN2Q8WYP3 895 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 ARHGEF2Q92974 986 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 VOPP1Q96AW1 172 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 C1orf159Q96HA4 380 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 FNBP1Q96RU3 617 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 PDCD2LQ9BRP1 358 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 ALG1Q9BT22 464 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 FSD1Q9BTV5 496 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 COLEC11Q9BWP8 271 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 PAIP1Q9H074 479 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 CDIP1Q9H305 208 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 LIN28AQ9H9Z2 209 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 PAPOLBQ9NRJ5 636 aaKnown RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 RXFP3Q9NSD7 469 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 AURKAIP1Q9NWT8 199 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 TMEM160Q9NX00 188 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 MCM9Q9NXL9 1143 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 PLA2G3Q9NZ20 509 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 STK26Q9P289 416 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 RASAL2Q9UJF2 1139 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 PCDHGB4Q9UN71 923 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 COQ6Q9Y2Z9 468 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 TELO2Q9Y4R8 837 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 PCDHA8Q9Y5H6 950 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 SNX8Q9Y5X2 465 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 GPR45Q9Y5Y3 372 aa3.97□□□□□ -1.77
HMGB1P12-201ENST00000438594 A0A1W2PPC4 97 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 F8W8V4 182 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 ARVCFO00192 962 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 MATN2O00339 956 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 AQP7O14520 342 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SPTLC2O15270 562 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 ZBTB43O43298 467 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 FMO6PO60774 539 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 ERAL1O75616 437 aaKnown RBP3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 STAM2O75886 525 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 KIAA0754O94854 1291 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 TMEM63AO94886 807 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SRGAP2BP0DMP2 458 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 NR2F1P10589 423 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 RARBP10826 455 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 CHMP24386 653 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 STIP1P31948 543 aaKnown RBP3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 IL12RB1P42701 662 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 CCR5P51681 352 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SRSF2Q01130 221 aaKnown RBP3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SATB1Q01826 763 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 KLHL30Q0D2K2 578 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 C17orf67Q0P5P2 114 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLC14A1Q13336 389 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SNAPC2Q13487 334 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 ACVR2BQ13705 512 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 GRM7Q14831 915 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 WTAPQ15007 396 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 ACAP1Q15027 740 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 ANKRD1Q15327 319 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 UBE3CQ15386 1083 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 DLGAP5Q15398 846 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 CSRP2Q16527 193 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 TBR1Q16650 682 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 ZNF674Q2M3X9 581 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 UAP1L1Q3KQV9 507 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLC35F1Q5T1Q4 408 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SLC9C2Q5TAH2 1124 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 MEX3CQ5U5Q3 659 aaKnown RBP3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SNX30Q5VWJ9 437 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 TANGO2Q6ICL3 276 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 ACAD10Q6JQN1 1059 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 NAA16Q6N069 864 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 WDR73Q6P4I2 378 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 SHQ1Q6PI26 577 aaKnown RBP3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 KCNT2Q6UVM3 1135 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 KCTD1Q719H9 257 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 BEND5Q7L4P6 421 aa3.96□□□□□ -1.78
HMGB1P12-201ENST00000438594 PRPF39Q86UA1 669 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms