RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 VIL1P09327 827 aaKnown RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 CKBP12277 381 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 RAD23BP54727 409 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 GYS2P54840 703 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 OXCT1P55809 520 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 AMHR2Q16671 573 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 STARD7Q9NQZ5 370 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 MORC2Q9Y6X9 1032 aaPredicted RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 TTLL13PA6NNM8 815 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 STX7O15400 261 aaKnown RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 ZNF280DQ6N043 979 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 DPF2Q92785 391 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 FBXO44Q9H4M3 255 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 ALG13Q9NP73 1137 aaKnown RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 H2AFY2Q9P0M6 372 aaPredicted RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 RAD51CO43502 376 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 PDHA1P08559 390 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 LRRC74AQ0VAA2 488 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 C4orf19Q8IY42 314 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 CEP70Q8NHQ1 597 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 APBB2Q92870 758 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 CPB2Q96IY4 423 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 PAWRQ96IZ0 340 aaKnown RBP16.44■□□□□ 0.22
PTPN13-204ENST00000436978 L3MBTL3Q96JM7 780 aaPredicted RBP16.44■□□□□ 0.22
PTPN13-204ENST00000436978 BRD8Q9H0E9 1235 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 RASSF10A6NK89 507 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 TIMM44O43615 452 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 AXLP30530 894 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 DAB2IPQ5VWQ8 1189 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 LVRNQ6Q4G3 990 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 APPL1Q9UKG1 709 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 NPTX2P47972 431 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 PLEKHA8Q96JA3 519 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 PRMT6Q96LA8 375 aaPredicted RBP16.44■□□□□ 0.22
PTPN13-204ENST00000436978 ZSWIM1Q9BR11 485 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 VTA1Q9NP79 307 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 CTXN3Q4LDR2 81 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 LRRC23Q53EV4 343 aaPredicted RBP16.44■□□□□ 0.22
PTPN13-204ENST00000436978 TC2NQ8N9U0 490 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 TMC2Q8TDI7 906 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 SLC20A1Q8WUM9 679 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 SPATC1LQ9H0A9 340 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 ADNPQ9H2P0 1102 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 USP18Q9UMW8 372 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 ARHGEF9O43307 516 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 MLNP12872 115 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 SOAT1P35610 550 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 CYP24A1Q07973 514 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 LAMTOR4Q0VGL1 99 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 GRB10Q13322 594 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 ZDHHC17Q8IUH5 632 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 RRN3Q9NYV6 651 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 VTNP04004 478 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 CLEC4FQ8N1N0 589 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 GFM2Q969S9 779 aaKnown RBP16.44■□□□□ 0.22
PTPN13-204ENST00000436978 AKAP10O43572 662 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 SKOR1P84550 965 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 SLC39A10Q9ULF5 831 aa16.44■□□□□ 0.22
PTPN13-204ENST00000436978 PRG3Q9Y2Y8 225 aaPredicted RBP16.44■□□□□ 0.22
PTPN13-204ENST00000436978 CXCL11O14625 94 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 VSNL1P62760 191 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 MYBPC2Q14324 1141 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 NIPA1Q7RTP0 329 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 RFWD2Q8NHY2 731 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 ZNF669Q96BR6 464 aaPredicted RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 EIF3LQ9Y262 564 aaKnown RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 DYRK3O43781 588 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 CYP11B1P15538 503 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 SDR42E2A6NKP2 422 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 TOMM70O94826 608 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 ZNF286BP0CG31 522 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 RENBPP51606 427 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 RAP1GDS1P52306 607 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 SFMBT1Q9UHJ3 866 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 STRNO43815 780 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 VPS26AO75436 327 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 PGK2P07205 417 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 KLRK1P26718 216 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 BST2Q10589 180 aaKnown RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 CNTN1Q12860 1018 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 NT5DC4Q86YG4 428 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 ZFYVE19Q96K21 471 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 RPRD1AQ96P16 312 aaPredicted RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 TRPM5Q9NZQ8 1165 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 A0A0A6YYK5 440 aaPredicted RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 PPP1R37O75864 691 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 GZMAP12544 262 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 COL5A2P05997 1499 aaPredicted RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 PGM5Q15124 567 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 THG1LQ9NWX6 298 aaKnown RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 UTP6Q9NYH9 597 aaKnown RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 SYNPO2Q9UMS6 1093 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 UBE2Q2LH0YL09 131 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 GIT2Q14161 759 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 NFE2Q16621 373 aaPredicted RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 KHDRBS2Q5VWX1 349 aaKnown RBP16.43■□□□□ 0.22
PTPN13-204ENST00000436978 ZNF410Q86VK4 478 aa16.43■□□□□ 0.22
PTPN13-204ENST00000436978 MED24O75448 989 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms