RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TJP2Q9UDY2 1190 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 SCINQ9Y6U3 715 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 E5RJQ4 531 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 BUB1O43683 1085 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 RB1P06400 928 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 CA3P07451 260 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 CTSAP10619 480 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 HADHBP55084 474 aaKnown RBP24.27■■□□□ 1.48
CPSF4-204ENST00000436336 ZNF268Q14587 947 aaPredicted RBP24.27■■□□□ 1.48
CPSF4-204ENST00000436336 CYP4A22Q5TCH4 519 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 ZMIZ2Q8NF64 920 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 SPPL2BQ8TCT7 592 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 CLSTN3Q9BQT9 956 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 NUP85Q9BW27 656 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 RHOBTB2Q9BYZ6 727 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 ABCB6Q9NP58 842 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 OSGEPQ9NPF4 335 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 DMAP1Q9NPF5 467 aaPredicted RBP24.27■■□□□ 1.48
CPSF4-204ENST00000436336 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.27■■□□□ 1.48
CPSF4-204ENST00000436336 PARVAQ9NVD7 372 aa24.27■■□□□ 1.48
CPSF4-204ENST00000436336 ABI2Q9NYB9 513 aaPredicted RBP24.27■■□□□ 1.48
CPSF4-204ENST00000436336 MTA2O94776 668 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 MOCS3O95396 460 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 TUBB4AP04350 444 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 RGS19P49795 217 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 CACNA2D1P54289 1103 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 ROR1Q01973 937 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 CREMQ03060 361 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 VSTM1Q6UX27 236 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 XYLT1Q86Y38 959 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 C3orf20Q8ND61 904 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 KCNK16Q96T55 309 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 TMEM30AQ9NV96 361 aa24.26■■□□□ 1.47
CPSF4-204ENST00000436336 TCRBV5S1A1TA0A578 114 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 MTMR11A4FU01 709 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 KIF2AO00139 706 aaPredicted RBP24.25■■□□□ 1.47
CPSF4-204ENST00000436336 ARHGEF15O94989 841 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 RPL17P18621 184 aaKnown RBP24.25■■□□□ 1.47
CPSF4-204ENST00000436336 OR1D2P34982 312 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 MAGEA11P43364 429 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 UBE3AQ05086 875 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 ZDHHC17Q8IUH5 632 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 PGLYRP2Q96PD5 576 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 PNPLA8Q9NP80 782 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 FNIP2Q9P278 1114 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 COG5Q9UP83 839 aa24.25■■□□□ 1.47
CPSF4-204ENST00000436336 WDR27A2RRH5 827 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 LILRB3O75022 631 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 CYP2F1P24903 491 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 DNAJB2P25686 324 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 MAMLD1Q13495 774 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 LLGL2Q6P1M3 1020 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 DNAJC24Q6P3W2 148 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 RNF19BQ6ZMZ0 732 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 PHLDB2Q86SQ0 1253 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 TRIM58Q8NG06 486 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 ZNF564Q8TBZ8 553 aaPredicted RBP24.24■■□□□ 1.47
CPSF4-204ENST00000436336 MCRS1Q96EZ8 462 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 TGS1Q96RS0 853 aaKnown RBP24.24■■□□□ 1.47
CPSF4-204ENST00000436336 C11orf84Q9BUA3 381 aaPredicted RBP24.24■■□□□ 1.47
CPSF4-204ENST00000436336 CHORDC1Q9UHD1 332 aaPredicted RBP24.24■■□□□ 1.47
CPSF4-204ENST00000436336 YBX2Q9Y2T7 364 aaKnown RBP24.24■■□□□ 1.47
CPSF4-204ENST00000436336 CAPN6Q9Y6Q1 641 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 ADAM12O43184 909 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 GABBR2O75899 941 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 GNG11P61952 73 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 ETF1P62495 437 aaKnown RBP24.24■■□□□ 1.47
CPSF4-204ENST00000436336 ZNF569Q5MCW4 686 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 ALS2CR12Q96Q35 445 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 LRRC4Q9HBW1 653 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 RXFP1Q9HBX9 757 aa24.24■■□□□ 1.47
CPSF4-204ENST00000436336 ALG13Q9NP73 1137 aaKnown RBP24.24■■□□□ 1.47
CPSF4-204ENST00000436336 GREB1Q4ZG55 1949 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 HHLA1C9JL84 531 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 PIK3R2O00459 728 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 GRIK1P39086 918 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 ERVK-21P61565 698 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 TAP1Q03518 808 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 RAB30Q15771 203 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 RAB41Q5JT25 222 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 OR6B2Q6IFH4 312 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 FAM183BPQ6ZVS7 135 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 ATAD1Q8NBU5 361 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 TPCN2Q8NHX9 752 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 SPPL3Q8TCT6 385 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 AUTS2Q8WXX7 1259 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 SELENOOQ9BVL4 669 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 PBX4Q9BYU1 374 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 PCDHGC5Q9Y5F6 944 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 MYO16Q9Y6X6 1858 aa24.23■■□□□ 1.47
CPSF4-204ENST00000436336 F8VP50 259 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 TRIM66O15016 1216 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 LCP1P13796 627 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 PBX2P40425 430 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 RAB33AQ14088 237 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 PPP1R15BQ5SWA1 713 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 TPGS2Q68CL5 300 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 TMC7Q7Z402 723 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 ZNF461Q8TAF7 563 aa24.22■■□□□ 1.47
CPSF4-204ENST00000436336 FEZF2Q8TBJ5 459 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms