RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 PDGFRBP09619 1106 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 BDNFP23560 247 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 MAGEA11P43364 429 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 DHPSP49366 369 aaPredicted RBP14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 CASP5P51878 434 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 SURF1Q15526 300 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 SOWAHAQ2M3V2 549 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 VSTM1Q6UX27 236 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 DENND5BQ6ZUT9 1274 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 DPH6Q7L8W6 267 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 HS2ST1Q7LGA3 356 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 OSTM1Q86WC4 334 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 CCDC65Q8IXS2 484 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 MYLPFQ96A32 169 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 FAM84AQ96KN4 292 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 SPACA7Q96KW9 195 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 LINC00597Q9H2U6 94 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 SNX25Q9H3E2 840 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 BCCIPQ9P287 314 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 ARHGAP26Q9UNA1 814 aa14.32□□□□□ -0.12
CDC42EP1-204ENST00000434728 ZNF233A6NK53 670 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 SLC9A3R1O14745 358 aaPredicted RBP14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 TM4SF5O14894 197 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 TRIM66O15016 1216 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 KIAA0391O15091 583 aaKnown RBP14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 MAP3K13O43283 966 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 ATP2C2O75185 946 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 SHC2P98077 582 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 IFRD2Q12894 506 aaPredicted RBP14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 DUOXA2Q1HG44 320 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 CCDC33Q8N5R6 958 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 DNAJC19Q96DA6 116 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 SPATA17Q96L03 361 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 CLIC6Q96NY7 704 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 PKMYT1Q99640 499 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 STRA6Q9BX79 667 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 PANK2Q9BZ23 570 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 TMEM9BQ9NQ34 198 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 SIX4Q9UIU6 781 aa14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 FBXO2Q9UK22 296 aaPredicted RBP14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 SRPRBQ9Y5M8 271 aaKnown RBP14.31□□□□□ -0.12
CDC42EP1-204ENST00000434728 LNP1A1A4G5 178 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 LEFTY2O00292 366 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 GABRDO14764 452 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 PFKLP17858 780 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 ZNF252P-AS1Q0IIN9 211 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 FOXC1Q12948 553 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 UAP1L1Q3KQV9 507 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 MDH1BQ5I0G3 518 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 PMS2CLQ68D20 193 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 CLEC17AQ6ZS10 378 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 FILIP1Q7Z7B0 1213 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 PGBD3Q8N328 593 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 PDILTQ8N807 584 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 USP33Q8TEY7 942 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 EZH1Q92800 747 aaPredicted RBP14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 CEP295NLQ96MC4 621 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 SLITRK1Q96PX8 696 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 FNBP1Q96RU3 617 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 INTS13Q9NVM9 706 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 SMPD4Q9NXE4 827 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 GCNT4Q9P109 453 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 MMP17Q9ULZ9 603 aa14.3□□□□□ -0.12
CDC42EP1-204ENST00000434728 FRYQ5TBA9 3013 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 FAM208BQ5VWN6 2430 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 ADH1CP00326 375 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 APODP05090 189 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 DLATP10515 647 aaKnown RBP14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 TCF3P15923 654 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 TNNI1P19237 187 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 LMO2P25791 158 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 PPP3CCP48454 512 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 TNNC1P63316 161 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 NUCB2P80303 420 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 RESTQ13127 1097 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 SH3PXD2AQ5TCZ1 1133 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 TDRD10Q5VZ19 366 aaKnown RBP14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 FAM171BQ6P995 826 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 LPCAT2Q7L5N7 544 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 DDX42Q86XP3 938 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 OR5B17Q8NGF7 314 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 OR6B3Q8NGW1 331 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 PIGKQ92643 395 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 CNOT6LQ96LI5 555 aaKnown RBP14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 LRRC27Q9C0I9 530 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 KIAA1586Q9HCI6 787 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 POLMQ9NP87 494 aaPredicted RBP14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 CPQQ9Y646 472 aa14.29□□□□□ -0.12
CDC42EP1-204ENST00000434728 F8VP50 259 aa14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 SCAMP3O14828 347 aaKnown RBP14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 KLF8O95600 359 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 CYP17A1P05093 508 aa14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 MBL2P11226 248 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 WARSP23381 471 aaKnown RBP14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 PTPRDP23468 1912 aa14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 TIE1P35590 1138 aa14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 GNL1P36915 607 aaPredicted RBP14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 OPRD1P41143 372 aa14.28□□□□□ -0.12
CDC42EP1-204ENST00000434728 USP46P62068 366 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms