RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 PALM2Q8IXS6 379 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 ADCY6O43306 1168 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 C22orf31O95567 290 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 SLC25A27O95847 323 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 SLC1A1P43005 524 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 CCNHP51946 323 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-203ENST00000434376 EIF3BP55884 814 aaKnown RBP16.31■□□□□ 0.2
SCARF1-203ENST00000434376 OVGP1Q12889 678 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 PTP4A2Q12974 167 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 CASC4Q6P4E1 433 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 SLC4A11Q8NBS3 891 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 FAM81BQ96LP2 452 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 PDZD7Q9H5P4 517 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 DHX35Q9H5Z1 703 aaKnown RBP16.31■□□□□ 0.2
SCARF1-203ENST00000434376 TMEM134Q9H6X4 195 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 NKIRAS1Q9NYS0 192 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 TNS1Q9HBL0 1735 aaKnown RBP16.31■□□□□ 0.2
SCARF1-203ENST00000434376 ATAD5Q96QE3 1844 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-203ENST00000434376 H0Y3Z8 333 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 I3L4J1 428 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 CLDN5O00501 218 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 SMPD1P17405 629 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 ITIH2P19823 946 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 ARHGAP1Q07960 439 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
SCARF1-203ENST00000434376 ARFGAP1Q8N6T3 406 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 PYROXD1Q8WU10 500 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 TMEM176AQ96HP8 235 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 ZFP42Q96MM3 310 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 ZMAT2Q96NC0 199 aaKnown RBP16.31■□□□□ 0.2
SCARF1-203ENST00000434376 KDM4CQ9H3R0 1056 aa16.31■□□□□ 0.2
SCARF1-203ENST00000434376 AVENQ9NQS1 362 aaPredicted RBP16.31■□□□□ 0.2
SCARF1-203ENST00000434376 TP73O15350 636 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 LIASO43766 372 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 CHRM1P11229 460 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-203ENST00000434376 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
SCARF1-203ENST00000434376 MCL1Q07820 350 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 CRYMQ14894 314 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 HADHQ16836 314 aaKnown RBP16.3■□□□□ 0.2
SCARF1-203ENST00000434376 TFDP3Q5H9I0 405 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 CCDC62Q6P9F0 684 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 ILDR2Q71H61 639 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 TTC16Q8NEE8 873 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 C2orf40Q9H1Z8 148 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 DCTN4Q9UJW0 460 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 FER1L6Q2WGJ9 1857 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 IGKV6D-21A0A0A0MT36 114 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 PRPSAP2O60256 369 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 EDNRBP24530 442 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 LMO2P25791 158 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 IVDP26440 423 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 CRADDP78560 199 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 FAM131BQ86XD5 332 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 ZNF677Q86XU0 584 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 IL1RAPL1Q9NZN1 696 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 USP18Q9UMW8 372 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 MEIS3P2A8K0S8 358 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 APRTP07741 180 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 CYP2C9P11712 490 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 MSS51Q4VC12 460 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 NOL9Q5SY16 702 aaKnown RBP16.3■□□□□ 0.2
SCARF1-203ENST00000434376 PMF1Q6P1K2 205 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 TAOK1Q7L7X3 1001 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 PHF13Q86YI8 300 aaPredicted RBP16.3■□□□□ 0.2
SCARF1-203ENST00000434376 DOCK3Q8IZD9 2030 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 EXD1Q8NHP7 514 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 RBM41Q96IZ5 413 aaKnown RBP16.3■□□□□ 0.2
SCARF1-203ENST00000434376 CCDC77Q9BR77 488 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 STYXL1Q9Y6J8 313 aa16.3■□□□□ 0.2
SCARF1-203ENST00000434376 KCNN4O15554 427 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 MGRN1O60291 552 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 NME3Q13232 169 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 CA9Q16790 459 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 TWF2Q6IBS0 349 aaKnown RBP16.29■□□□□ 0.2
SCARF1-203ENST00000434376 TRIM72Q6ZMU5 477 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 C3orf62Q6ZUJ4 267 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 FAM183BPQ6ZVS7 135 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 CCDC110Q8TBZ0 833 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 TGS1Q96RS0 853 aaKnown RBP16.29■□□□□ 0.2
SCARF1-203ENST00000434376 RAB6BQ9NRW1 208 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 PHIPQ8WWQ0 1821 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 CXCL11O14625 94 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 FAM189A1O60320 539 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 FAM155BO75949 473 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 PDHA1P08559 390 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 HADHBP55084 474 aaKnown RBP16.29■□□□□ 0.2
SCARF1-203ENST00000434376 YWHAEP62258 255 aaKnown RBP16.29■□□□□ 0.2
SCARF1-203ENST00000434376 BIRC2Q13490 618 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 CCNG2Q16589 344 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 RCOR2Q8IZ40 523 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 RUNDC3BQ96NL0 473 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 ADAM7Q9H2U9 754 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 NOP53Q9NZM5 478 aaKnown RBP16.29■□□□□ 0.2
SCARF1-203ENST00000434376 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 KCNG1Q9UIX4 513 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 GGA2Q9UJY4 613 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 MFHAS1Q9Y4C4 1052 aa16.29■□□□□ 0.2
SCARF1-203ENST00000434376 MTA2O94776 668 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms