RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 NELFBQ8WX92 580 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 RSPRY1Q96DX4 576 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 SMARCD1Q96GM5 515 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 MSANTD3Q96H12 275 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 TTLL2Q9BWV7 592 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 FOXQ1Q9C009 403 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 LTB4R2Q9NPC1 389 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 TDP1Q9NUW8 608 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 RAB20Q9NX57 234 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 TRPM5Q9NZQ8 1165 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 NCANO14594 1321 aa14.04□□□□□ -0.16
TRAPPC4-202ENST00000434101 TRAV19A0A0A6YYK7 116 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 PPP1R3GB7ZBB8 358 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 BIN1O00499 593 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 CLDN5O00501 218 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 TADA3O75528 432 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 RTN3O95197 1032 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 USP17L7P0C7H9 530 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 CD44P16070 742 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 PFKLP17858 780 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 MAGEA9P43362 315 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 INCA1Q0VD86 236 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 CCDC40Q4G0X9 1142 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 FRMD5Q7Z6J6 570 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 FILIP1Q7Z7B0 1213 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 GPIHBP1Q8IV16 184 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 NUP93Q8N1F7 819 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 SLITRK1Q96PX8 696 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 NT5C1AQ9BXI3 368 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 FAM124BQ9H5Z6 455 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 C8orf33Q9H7E9 229 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 APOBEC3GQ9HC16 384 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 TRPC7Q9HCX4 862 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 DMAP1Q9NPF5 467 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.03□□□□□ -0.161e-22■■■■■ 419.2
TRAPPC4-202ENST00000434101 PIAS3Q9Y6X2 628 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 PATJQ8NI35 1801 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 MYO16Q9Y6X6 1858 aa14.03□□□□□ -0.16
TRAPPC4-202ENST00000434101 FAM170BA6NMN3 283 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 ARNTLO00327 626 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 AP1G2O75843 785 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 CKMP06732 381 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 DCNP07585 359 aaKnown RBP14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 BMP6P22004 513 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 KPNA1P52294 538 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 PAK1Q13153 545 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 TTI2Q6NXR4 508 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 CC2D1AQ6P1N0 951 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 SEMA4DQ92854 862 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 ATOH1Q92858 354 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 USP13Q92995 863 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 SMG9Q9H0W8 520 aaKnown RBP14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 KRT82Q9NSB4 513 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 KIAA1468Q9P260 1216 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 HMGXB4Q9UGU5 601 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 CTNND2Q9UQB3 1225 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 COQ4Q9Y3A0 265 aa14.02□□□□□ -0.17
TRAPPC4-202ENST00000434101 COL4A3Q01955 1670 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 H0Y858 1186 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 CILPO75339 1184 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 FGFR1OPO95684 399 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 GNA14O95837 355 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 CCDC130P13994 396 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 CD58P19256 250 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 CD72P21854 359 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 TARSP26639 723 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 YWHAQP27348 245 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 CACNA2D1P54289 1103 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 USP46P62068 366 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 CAMK4Q16566 473 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 PAQR9Q6ZVX9 377 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 FUKQ8N0W3 1084 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 PDZD8Q8NEN9 1154 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 SLC2A14Q8TDB8 520 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 OVCA2Q8WZ82 227 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 FAM3CQ92520 227 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 SLC35C1Q96A29 364 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 LRRC3BQ96PB8 259 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 DUSP9Q99956 384 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 FAM49BQ9NUQ9 324 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 TMEM30AQ9NV96 361 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 COMMD8Q9NX08 183 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 DLGAP2Q9P1A6 1054 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 CCL26Q9Y258 94 aa14.01□□□□□ -0.17
TRAPPC4-202ENST00000434101 ZNF840PA6NDX5 716 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 FAM200BP0CF97 657 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 HDCP19113 662 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 RPS9P46781 194 aaKnown RBP14□□□□□ -0.17
TRAPPC4-202ENST00000434101 YWHAEP62258 255 aaKnown RBP14□□□□□ -0.17
TRAPPC4-202ENST00000434101 CETN1Q12798 172 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 IFRD2Q12894 506 aaPredicted RBP14□□□□□ -0.17
TRAPPC4-202ENST00000434101 TAF10Q12962 218 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 ORC1Q13415 861 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 ANGPT1Q15389 498 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 ITPRIPL2Q3MIP1 535 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 CBWD6Q4V339 395 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 CBWD3Q5JTY5 395 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 CBWD5Q5RIA9 395 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 CLEC17AQ6ZS10 378 aa14□□□□□ -0.17
TRAPPC4-202ENST00000434101 RALGPS2Q86X27 583 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms