RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 PCED1BQ96HM7 432 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 ARHGAP26Q9UNA1 814 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 WNT6Q9Y6F9 365 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 SPTBN2O15020 2390 aa17.28■□□□□ 0.36
ACTB-205ENST00000432588 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.27■□□□□ 0.36
ACTB-205ENST00000432588 DCDC2BA2VCK2 349 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 AKAP3O75969 853 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 NFATC1O95644 943 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 CST3P01034 146 aaPredicted RBP17.27■□□□□ 0.36
ACTB-205ENST00000432588 TCF3P15923 654 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 ME1P48163 572 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 PXNP49023 591 aaPredicted RBP17.27■□□□□ 0.36
ACTB-205ENST00000432588 NOP14P78316 857 aaKnown RBP17.27■□□□□ 0.36
ACTB-205ENST00000432588 EML3Q32P44 896 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 WDR72Q3MJ13 1102 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 MDH1BQ5I0G3 518 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 OR6B3Q8NGW1 331 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 SYAP1Q96A49 352 aaPredicted RBP17.27■□□□□ 0.36
ACTB-205ENST00000432588 LOXL4Q96JB6 756 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 C8orf48Q96LL4 319 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 TTLL2Q9BWV7 592 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 ELOVL4Q9GZR5 314 aa17.27■□□□□ 0.36
ACTB-205ENST00000432588 FBRSL1Q9HCM7 1045 aaKnown RBP17.27■□□□□ 0.36
ACTB-205ENST00000432588 PVALEFA0A1B0GWK0 134 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 SLC30A4O14863 429 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 PHACTR2O75167 634 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 ZSCAN22P10073 491 aaPredicted RBP17.26■□□□□ 0.35
ACTB-205ENST00000432588 ATICP31939 592 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 EHHADHQ08426 723 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 BMT2Q1RMZ1 405 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 ATL3Q6DD88 541 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 C12orf56Q8IXR9 622 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 RPLP0P6Q8NHW5 317 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 GOLGA5Q8TBA6 731 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 SNX21Q969T3 373 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 ACDQ96AP0 544 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 MRPL45Q9BRJ2 306 aaKnown RBP17.26■□□□□ 0.35
ACTB-205ENST00000432588 BLZF1Q9H2G9 400 aa17.26■□□□□ 0.35
ACTB-205ENST00000432588 A8MXQ7 604 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 F8VP50 259 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 AXIN1O15169 862 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 EXOC3O60645 756 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 CLSTN1O94985 981 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 STAU1O95793 577 aaKnown RBP17.25■□□□□ 0.35
ACTB-205ENST00000432588 PTPN1P18031 435 aaKnown RBP17.25■□□□□ 0.35
ACTB-205ENST00000432588 HOXC13P31276 330 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 USP46P62068 366 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 PSMD2Q13200 908 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 KNOP1Q1ED39 458 aaKnown RBP17.25■□□□□ 0.35
ACTB-205ENST00000432588 FOXD4L6Q3SYB3 417 aaPredicted RBP17.25■□□□□ 0.35
ACTB-205ENST00000432588 TDRD10Q5VZ19 366 aaKnown RBP17.25■□□□□ 0.35
ACTB-205ENST00000432588 NAIF1Q69YI7 327 aaPredicted RBP17.25■□□□□ 0.35
ACTB-205ENST00000432588 FOXD4L3Q6VB84 417 aaPredicted RBP17.25■□□□□ 0.35
ACTB-205ENST00000432588 SYT13Q7L8C5 426 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 CEP57L1Q8IYX8 460 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 KIAA1958Q8N8K9 716 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 C12orf50Q8NA57 414 aaPredicted RBP17.25■□□□□ 0.35
ACTB-205ENST00000432588 SLITRK1Q96PX8 696 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 SLC39A2Q9NP94 309 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 NXF1Q9UBU9 619 aaKnown RBP17.25■□□□□ 0.35
ACTB-205ENST00000432588 CFAP45Q9UL16 551 aa17.25■□□□□ 0.35
ACTB-205ENST00000432588 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.24■□□□□ 0.35
ACTB-205ENST00000432588 ZNF840PA6NDX5 716 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 LEFTY2O00292 366 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 APBB3O95704 486 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 F13A1P00488 732 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 ABL1P00519 1130 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 CASP1P29466 404 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 AFMP43652 599 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 AP3M2P53677 418 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 MYL6P60660 151 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 RESP18Q5W5W9 173 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 KBTBD6Q86V97 674 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 B3GALNT2Q8NCR0 500 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 HHIPQ96QV1 700 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 ARRDC1-AS1Q9H2J1 176 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 PCDHA7Q9UN72 937 aa17.24■□□□□ 0.35
ACTB-205ENST00000432588 ATP8B3O60423 1300 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 SLC9A3R1O14745 358 aaPredicted RBP17.23■□□□□ 0.35
ACTB-205ENST00000432588 RAP1GAPP47736 663 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 SLC7A9P82251 487 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 BIRC3Q13489 604 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 CUL4BQ13620 913 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 DMC1Q14565 340 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 AASDHQ4L235 1098 aaPredicted RBP17.23■□□□□ 0.35
ACTB-205ENST00000432588 DDX1Q92499 740 aaKnown RBP17.23■□□□□ 0.35
ACTB-205ENST00000432588 ZNF516Q92618 1163 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 XYLT2Q9H1B5 865 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 LINC00597Q9H2U6 94 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 PCDHGA5Q9Y5G8 931 aa17.23■□□□□ 0.35
ACTB-205ENST00000432588 ANAPC1Q9H1A4 1944 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 RTN3O95197 1032 aaPredicted RBP17.22■□□□□ 0.35
ACTB-205ENST00000432588 EPN2O95208 641 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 TAF10Q12962 218 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 ELF2Q15723 593 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 ZNF699Q32M78 642 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 IL31Q6EBC2 164 aa17.22■□□□□ 0.35
ACTB-205ENST00000432588 DDX42Q86XP3 938 aaKnown RBP eCLIP17.22■□□□□ 0.352e-24■□□□□ 9.3
ACTB-205ENST00000432588 NUP93Q8N1F7 819 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms