RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 DDX1Q92499 740 aaKnown RBP11.63□□□□□ -0.55
CHD4-202ENST00000430771 SPATA17Q96L03 361 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 GUCD1Q96NT3 240 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 SMOQ99835 787 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 ZSWIM1Q9BR11 485 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 MIS12Q9H081 205 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 LHX5Q9H2C1 402 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 CRISPLD1Q9H336 500 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 CYLDQ9NQC7 956 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 SLC27A5Q9Y2P5 690 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 MYO7AQ13402 2215 aa11.63□□□□□ -0.55
CHD4-202ENST00000430771 PRRC2BQ5JSZ5 2229 aaKnown RBP11.62□□□□□ -0.55
CHD4-202ENST00000430771 RTN3O95197 1032 aaPredicted RBP11.62□□□□□ -0.55
CHD4-202ENST00000430771 PTMAP06454 111 aaKnown RBP11.62□□□□□ -0.55
CHD4-202ENST00000430771 SPATA31D3P0C874 917 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 CSH1P0DML2 217 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 CSH2P0DML3 217 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 SKILP12757 684 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 ATF6P18850 670 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 ACADSBP45954 432 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 NSFP46459 744 aaKnown RBP11.62□□□□□ -0.55
CHD4-202ENST00000430771 NOMO3P69849 1222 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 PDCLQ13371 301 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
CHD4-202ENST00000430771 KCNC3Q14003 757 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 DENND1BQ6P3S1 775 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 CYP26C1Q6V0L0 522 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 TMEM184AQ6ZMB5 413 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 SPATA31D4Q6ZUB0 917 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 DENND5BQ6ZUT9 1274 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 ZNF571Q7Z3V5 609 aaPredicted RBP11.62□□□□□ -0.55
CHD4-202ENST00000430771 PIGZQ86VD9 579 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 SIX6OS1Q8N1H7 587 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 CCDC112Q8NEF3 446 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 CMASQ8NFW8 434 aaPredicted RBP11.62□□□□□ -0.55
CHD4-202ENST00000430771 UBA3Q8TBC4 463 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 PABPC5Q96DU9 382 aaKnown RBP11.62□□□□□ -0.55
CHD4-202ENST00000430771 PDLIM2Q96JY6 352 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 HSFY1Q96LI6 401 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHD4-202ENST00000430771 UBXN6Q9BZV1 441 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 LRRC4Q9HBW1 653 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 CLDND1Q9NY35 253 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 UXTQ9UBK9 157 aaPredicted RBP11.62□□□□□ -0.55
CHD4-202ENST00000430771 ASB3Q9Y575 518 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 GREB1Q4ZG55 1949 aa11.62□□□□□ -0.55
CHD4-202ENST00000430771 SZT2Q5T011 3432 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 AKR1B10O60218 316 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 SOAT2O75908 522 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 GLP2RO95838 553 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 CYP1A1P04798 512 aaPredicted RBP11.61□□□□□ -0.55
CHD4-202ENST00000430771 HOXB8P17481 243 aaPredicted RBP11.61□□□□□ -0.55
CHD4-202ENST00000430771 FECHP22830 423 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 SSTR3P32745 418 aaPredicted RBP11.61□□□□□ -0.55
CHD4-202ENST00000430771 GTF2F1P35269 517 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■□□□□ 10.8
CHD4-202ENST00000430771 CYLC1P35663 651 aaPredicted RBP11.61□□□□□ -0.55
CHD4-202ENST00000430771 GPD2P43304 727 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 GPR15P49685 360 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 CDR1P51861 262 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 SLC5A3P53794 718 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 CACNA2D1P54289 1103 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 CENPCQ03188 943 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 DDR2Q16832 855 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 CLEC16AQ2KHT3 1053 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 NAA35Q5VZE5 725 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 ANKRD54Q6NXT1 300 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 WDR59Q6PJI9 974 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 CCDC186Q7Z3E2 898 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 TMTC1Q8IUR5 882 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 NUP93Q8N1F7 819 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 LEMD2Q8NC56 503 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 ZMIZ2Q8NF64 920 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 VN1R2Q8NFZ6 395 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 STK32AQ8WU08 396 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 KCTD13Q8WZ19 329 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 PSMG2Q969U7 264 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 CCDC42Q96M95 316 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 GCNAQ96QF7 691 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 SYT11Q9BT88 431 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 FBXO44Q9H4M3 255 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 SYNCQ9H7C4 482 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 ST7Q9NRC1 585 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 COMMD8Q9NX08 183 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 MTMR10Q9NXD2 777 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 ARHGAP20Q9P2F6 1191 aa11.61□□□□□ -0.55
CHD4-202ENST00000430771 SLC38A8A6NNN8 435 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 CCL16O15467 120 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 SART1O43290 800 aaKnown RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 TBX10O75333 385 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 RFPL2O75678 378 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 BEST1O76090 585 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 FBXO21O94952 628 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 IPO7O95373 1038 aaKnown RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 FGF19O95750 216 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 CALB1P05937 261 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 PLEKP08567 350 aaPredicted RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 GZMAP12544 262 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 UNGP13051 313 aaPredicted RBP11.6□□□□□ -0.55
CHD4-202ENST00000430771 CHRNB2P17787 502 aa11.6□□□□□ -0.55
CHD4-202ENST00000430771 EIF4A3P38919 411 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms