RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 IKBKBO14920 756 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 MAPK13O15264 365 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 ARSAP15289 507 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 CTHP32929 405 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 RPS9P46781 194 aaKnown RBP13.33□□□□□ -0.28
SMPD4-204ENST00000430682 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 ADAM9Q13443 819 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 SGSM1Q2NKQ1 1148 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 NAIF1Q69YI7 327 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-204ENST00000430682 DENND5BQ6ZUT9 1274 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 ACOT1Q86TX2 421 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 FAM186BQ8IYM0 893 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 FUKQ8N0W3 1084 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 ARL14EPQ8N8R7 260 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-204ENST00000430682 ZMIZ2Q8NF64 920 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 CSGALNACT1Q8TDX6 532 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 MRPS31Q92665 395 aaKnown RBP13.33□□□□□ -0.28
SMPD4-204ENST00000430682 SEMA4DQ92854 862 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 CCDC47Q96A33 483 aaKnown RBP13.33□□□□□ -0.28
SMPD4-204ENST00000430682 NELL2Q99435 816 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 TTLL2Q9BWV7 592 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 TRPC7Q9HCX4 862 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 TDP1Q9NUW8 608 aa13.33□□□□□ -0.28
SMPD4-204ENST00000430682 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 MAN2B1O00754 1011 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 BEST1O76090 585 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 TDGF1P13385 188 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 CCDC130P13994 396 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
SMPD4-204ENST00000430682 DDX6P26196 483 aaKnown RBP eCLIP13.32□□□□□ -0.282e-8■■■■■ 34.9
SMPD4-204ENST00000430682 PSMC2P35998 433 aaKnown RBP13.32□□□□□ -0.28
SMPD4-204ENST00000430682 AVPR1AP37288 418 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 PGFP49763 221 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 KPNA1P52294 538 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-204ENST00000430682 NDST1P52848 882 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 PON2Q15165 354 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 MAPRE1Q15691 268 aaKnown RBP13.32□□□□□ -0.28
SMPD4-204ENST00000430682 ZNF77Q15935 545 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 ANKRD40Q6AI12 368 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 ISM2Q6H9L7 571 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 Q6ZS52 159 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 C12orf29Q8N999 325 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 WHAMMQ8TF30 809 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 C8orf48Q96LL4 319 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 RNF38Q9H0F5 515 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 CHRDQ9H2X0 955 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 EBF3Q9H4W6 596 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 FBRSL1Q9HCM7 1045 aaKnown RBP13.32□□□□□ -0.28
SMPD4-204ENST00000430682 UXTQ9UBK9 157 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-204ENST00000430682 FRMD4BQ9Y2L6 1034 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 DNAH14Q0VDD8 3507 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 SPAG17Q6Q759 2223 aa13.32□□□□□ -0.28
SMPD4-204ENST00000430682 RALGAPA1Q6GYQ0 2036 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 ZNF840PA6NDX5 716 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 SOBPA7XYQ1 873 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 TNFRSF10BO14763 440 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 BMP6P22004 513 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 PIK3CAP42336 1068 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 MLLT6P55198 1093 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 NOP14P78316 857 aaKnown RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 CSTF1Q05048 431 aaKnown RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 TAF10Q12962 218 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 USP4Q13107 963 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 EDRF1Q3B7T1 1238 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 ZNF658Q5TYW1 1059 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 PKN3Q6P5Z2 889 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 INTS8Q75QN2 995 aaKnown RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 FAM35AQ86V20 835 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 ZC3H3Q8IXZ2 948 aaKnown RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 CRYBG2Q8N1P7 616 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 SCAMP5Q8TAC9 235 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 NELL1Q92832 810 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 NKD2Q969F2 451 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 TIGD1Q96MW7 591 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 SMOQ99835 787 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 LINC00597Q9H2U6 94 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 MRPS17Q9Y2R5 130 aaKnown RBP13.31□□□□□ -0.28
SMPD4-204ENST00000430682 WNT6Q9Y6F9 365 aa13.31□□□□□ -0.28
SMPD4-204ENST00000430682 TRAV19A0A0A6YYK7 116 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 ANTXRLA6NF34 631 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 SCAMP3O14828 347 aaKnown RBP13.3□□□□□ -0.28
SMPD4-204ENST00000430682 TRIM66O15016 1216 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 LAMTOR5O43504 91 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 KIF20AO95235 890 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 CKMP06732 381 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 HDCP19113 662 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 SATB1Q01826 763 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 RUNX3Q13761 415 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 CCINQ13939 588 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 MTF1Q14872 753 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 ITPRIPL2Q3MIP1 535 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 COBLL1Q53SF7 1204 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 RALGPS2Q86X27 583 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-204ENST00000430682 ADSSL1Q8N142 457 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 TTC16Q8NEE8 873 aa13.3□□□□□ -0.28
SMPD4-204ENST00000430682 SH3RF2Q8TEC5 729 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms