RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ARHGEF19Q8IW93 802 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 CCDC24Q8N4L8 307 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 AP1S3Q96PC3 154 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 C12orf4Q9NQ89 552 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 ANAPC2Q9UJX6 822 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 A1BGP04217 495 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 AP3M2P53677 418 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 GEMIN4P57678 1058 aaKnown RBP17.02■□□□□ 0.32
RIF1-204ENST00000430328 DHX40Q8IX18 779 aaKnown RBP17.02■□□□□ 0.32
RIF1-204ENST00000430328 CHPFQ8IZ52 775 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 CATSPERBQ9H7T0 1116 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 CAB39LQ9H9S4 337 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 SH3GLB2Q9NR46 395 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 RBAKQ9NYW8 714 aaPredicted RBP17.02■□□□□ 0.32
RIF1-204ENST00000430328 POTECB2RU33 542 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 KLHL41O60662 606 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 STK4Q13043 487 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 TRMT5Q32P41 509 aaKnown RBP17.02■□□□□ 0.32
RIF1-204ENST00000430328 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.02■□□□□ 0.32
RIF1-204ENST00000430328 STN1Q9H668 368 aaKnown RBP17.02■□□□□ 0.32
RIF1-204ENST00000430328 PRODHO43272 600 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 SSTR3P32745 418 aaPredicted RBP17.02■□□□□ 0.31
RIF1-204ENST00000430328 CBX5P45973 191 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 PTSQ03393 145 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 ARID5BQ14865 1188 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 UBE2SQ16763 222 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 RPTNQ6XPR3 784 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 KLHL32Q96NJ5 620 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 COPRSQ9NQ92 184 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 MIEF1Q9NQG6 463 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 EURLQ9NYK6 297 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 R3HDM2Q9Y2K5 976 aaKnown RBP17.02■□□□□ 0.31
RIF1-204ENST00000430328 UTYO14607 1347 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 PTGES3LE9PB15 166 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 VAV1P15498 845 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 DDX39BQ13838 428 aaKnown RBP17.02■□□□□ 0.31
RIF1-204ENST00000430328 C1QTNF1Q9BXJ1 281 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 BLMP54132 1417 aaPredicted RBP17.02■□□□□ 0.31
RIF1-204ENST00000430328 CCDC189A1A4V9 331 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 MAGEA4P43358 317 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 USP17L2Q6R6M4 530 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 FAM228AQ86W67 206 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 SPATA2LQ8IUW3 424 aaPredicted RBP17.02■□□□□ 0.31
RIF1-204ENST00000430328 MCUBQ9NWR8 336 aa17.02■□□□□ 0.31
RIF1-204ENST00000430328 IRAK1P51617 712 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 SFSWAPQ12872 951 aaKnown RBP17.01■□□□□ 0.31
RIF1-204ENST00000430328 MROH9Q5TGP6 573 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 SHCBP1LQ9BZQ2 653 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.315e-7■■■■■ 36.2
RIF1-204ENST00000430328 NR5A2O00482 541 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 EIF3MQ7L2H7 374 aaKnown RBP17.01■□□□□ 0.31
RIF1-204ENST00000430328 TTC29Q8NA56 475 aaPredicted RBP17.01■□□□□ 0.31
RIF1-204ENST00000430328 STX16-NPEPL1H3BU86 382 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 STX16O14662 325 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
RIF1-204ENST00000430328 EEF1AKMT1Q8WVE0 214 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 EYA1Q99502 592 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 GNG14A0A1W2PPG7 69 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 ASB14A6NK59 587 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 S100A2P29034 98 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 PRMT9Q6P2P2 845 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 B3GALNT2Q8NCR0 500 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 GAL3ST3Q96A11 431 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 ZNF560Q96MR9 790 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 IRAK3Q9Y616 596 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 ADGRG1Q9Y653 693 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 LOC100506127A0A0U1RQW1 187 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 SMIM22K7EJ46 135 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 HOXA13P31271 388 aaPredicted RBP17.01■□□□□ 0.31
RIF1-204ENST00000430328 CRNNQ9UBG3 495 aaPredicted RBP17.01■□□□□ 0.31
RIF1-204ENST00000430328 SCTRP47872 440 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 USP13Q92995 863 aaPredicted RBP17.01■□□□□ 0.31
RIF1-204ENST00000430328 RAD54BQ9Y620 910 aa17.01■□□□□ 0.31
RIF1-204ENST00000430328 MTSS1O43312 755 aa17■□□□□ 0.31
RIF1-204ENST00000430328 PDK1Q15118 436 aa17■□□□□ 0.31
RIF1-204ENST00000430328 TBCELQ5QJ74 424 aa17■□□□□ 0.31
RIF1-204ENST00000430328 B3GNT6Q6ZMB0 384 aa17■□□□□ 0.31
RIF1-204ENST00000430328 C9orf72Q96LT7 481 aa17■□□□□ 0.31
RIF1-204ENST00000430328 PRKD2Q9BZL6 878 aa17■□□□□ 0.31
RIF1-204ENST00000430328 SLC52A2Q9HAB3 445 aa17■□□□□ 0.31
RIF1-204ENST00000430328 USP19O94966 1318 aa17■□□□□ 0.31
RIF1-204ENST00000430328 SASH1O94885 1247 aa17■□□□□ 0.31
RIF1-204ENST00000430328 EIF2AK2P19525 551 aaKnown RBP17■□□□□ 0.31
RIF1-204ENST00000430328 PRELPP51888 382 aa17■□□□□ 0.31
RIF1-204ENST00000430328 TGM3Q08188 693 aa17■□□□□ 0.31
RIF1-204ENST00000430328 ULK2Q8IYT8 1036 aa17■□□□□ 0.31
RIF1-204ENST00000430328 GSDMCQ9BYG8 508 aa17■□□□□ 0.31
RIF1-204ENST00000430328 SNX8Q9Y5X2 465 aa17■□□□□ 0.31
RIF1-204ENST00000430328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17■□□□□ 0.31
RIF1-204ENST00000430328 SUPT7LO94864 414 aa17■□□□□ 0.31
RIF1-204ENST00000430328 FNIP1Q8TF40 1166 aa17■□□□□ 0.31
RIF1-204ENST00000430328 KIF12Q96FN5 646 aa17■□□□□ 0.31
RIF1-204ENST00000430328 OTUD5Q96G74 571 aa17■□□□□ 0.31
RIF1-204ENST00000430328 OSBPL5Q9H0X9 879 aaPredicted RBP17■□□□□ 0.31
RIF1-204ENST00000430328 TCEA3O75764 348 aa17■□□□□ 0.31
RIF1-204ENST00000430328 GRIK3Q13003 919 aa17■□□□□ 0.31
RIF1-204ENST00000430328 AGPAT1Q99943 283 aa17■□□□□ 0.31
RIF1-204ENST00000430328 WDR41Q9HAD4 459 aa17■□□□□ 0.31
RIF1-204ENST00000430328 WDR35Q9P2L0 1181 aa17■□□□□ 0.31
RIF1-204ENST00000430328 FBXO40Q9UH90 709 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms