RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 VAMP7P51809 220 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 MCCD1P59942 119 aaPredicted RBP18.06■□□□□ 0.48
UBE3D-204ENST00000430071 USP46P62068 366 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 CFAP221Q4G0U5 840 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 ANO6Q4KMQ2 910 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 MDH1BQ5I0G3 518 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 IRF2BP1Q8IU81 584 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 YAF2Q8IY57 180 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 CMTM8Q8IZV2 173 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 OR6B3Q8NGW1 331 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 PCED1BQ96HM7 432 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 CYP2S1Q96SQ9 504 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 OSBPL6Q9BZF3 934 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 ABCB6Q9NP58 842 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 TRPV5Q9NQA5 729 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 SPATA6Q9NWH7 488 aaPredicted RBP18.06■□□□□ 0.48
UBE3D-204ENST00000430071 MAGEC2Q9UBF1 373 aaPredicted RBP18.06■□□□□ 0.48
UBE3D-204ENST00000430071 KIAA1549LQ6ZVL6 1849 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 SPAG17Q6Q759 2223 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 CLDN5O00501 218 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 DPYSL4O14531 572 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 TACC1O75410 805 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 KRT13P13646 458 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 RPL10AP62906 217 aaKnown RBP18.05■□□□□ 0.48
UBE3D-204ENST00000430071 CYP27A1Q02318 531 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 BIRC3Q13489 604 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 TRPC3Q13507 836 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 TSSK4Q6SA08 328 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 SCARA5Q6ZMJ2 495 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 BPIFB1Q8TDL5 484 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 FAM3CQ92520 227 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 E2F7Q96AV8 911 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 BCO2Q9BYV7 579 aa18.05■□□□□ 0.48
UBE3D-204ENST00000430071 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.05■□□□□ 0.484e-6■■■■■ 111.8
UBE3D-204ENST00000430071 RBM12Q9NTZ6 932 aaKnown RBP18.05■□□□□ 0.48
UBE3D-204ENST00000430071 ARMCX3Q9UH62 379 aaPredicted RBP18.05■□□□□ 0.48
UBE3D-204ENST00000430071 OTOL1A6NHN0 477 aaPredicted RBP18.04■□□□□ 0.48
UBE3D-204ENST00000430071 PHACTR2O75167 634 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 CCDC192P0DO97 292 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 WEE1P30291 646 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 HOXC13P31276 330 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 MAGEA11P43364 429 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 ENPEPQ07075 957 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 PPP3CAQ08209 521 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 MTAPQ13126 283 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 GAS6Q14393 721 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 TRIM68Q6AZZ1 485 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 SPOPLQ6IQ16 392 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 MYCBPAPQ8TBZ2 947 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 ENOX1Q8TC92 643 aaKnown RBP18.04■□□□□ 0.48
UBE3D-204ENST00000430071 FUBP3Q96I24 572 aaKnown RBP eCLIP18.04■□□□□ 0.48
UBE3D-204ENST00000430071 MYRFLQ96LU7 910 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 GCNAQ96QF7 691 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 SNX25Q9H3E2 840 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 GKN1Q9NS71 199 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 DMXL1Q9Y485 3027 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 C2orf78A6NCI8 922 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 CHRNB1P11230 501 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 PTPN1P18031 435 aaKnown RBP18.04■□□□□ 0.48
UBE3D-204ENST00000430071 TNNC1P63316 161 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 NCOA4Q13772 614 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 TPD52L1Q16890 204 aaPredicted RBP18.04■□□□□ 0.48
UBE3D-204ENST00000430071 CCDC40Q4G0X9 1142 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 MON1AQ86VX9 555 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 CSGALNACT1Q8TDX6 532 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 NKD2Q969F2 451 aaPredicted RBP18.04■□□□□ 0.48
UBE3D-204ENST00000430071 CHFRQ96EP1 664 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 TRMT2BQ96GJ1 504 aaKnown RBP18.04■□□□□ 0.48
UBE3D-204ENST00000430071 NELL2Q99435 816 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 B3GNT5Q9BYG0 378 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 ZNF518BQ9C0D4 1074 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 LMAN1LQ9HAT1 526 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 TRPC7Q9HCX4 862 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 HPS4Q9NQG7 708 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 OBP2AQ9NY56 170 aa18.04■□□□□ 0.48
UBE3D-204ENST00000430071 F8VP50 259 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 SPECC1L-ADORA2AF8WAN1 911 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 MAN2B1O00754 1011 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 IKBKBO14920 756 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 FGFR1OPO95684 399 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 STAU1O95793 577 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 GNA14O95837 355 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 GRIK1P39086 918 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 RPS9P46781 194 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 GCLMP48507 274 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 KPNA1P52294 538 aaPredicted RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 MARSP56192 900 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 CSTF1Q05048 431 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 ORC1Q13415 861 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 ZNF699Q32M78 642 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 ARHGAP29Q52LW3 1261 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 C4orf50Q6ZRC1 276 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 SV2AQ7L0J3 742 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 TRIM59Q8IWR1 403 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 CELF5Q8N6W0 485 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 ARL14EPQ8N8R7 260 aaPredicted RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 MRPS31Q92665 395 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 SLC35C1Q96A29 364 aa18.03■□□□□ 0.48
UBE3D-204ENST00000430071 CNOT6LQ96LI5 555 aaKnown RBP18.03■□□□□ 0.48
UBE3D-204ENST00000430071 THAP9Q9H5L6 903 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms