RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 PLA2G4AP47712 749 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 GPR15P49685 360 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 SNX16P57768 344 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 RPL10AP62906 217 aaKnown RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 ADIGQ0VDE8 80 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 IFRD2Q12894 506 aaPredicted RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 DUSP4Q13115 394 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 CAMK1Q14012 370 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 DDR2Q16832 855 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 PTPN20Q4JDL3 420 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 PKDCCQ504Y2 493 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 HS1BP3Q53T59 392 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 C2CD6Q53TS8 623 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 CYP4A22Q5TCH4 519 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 ACAD10Q6JQN1 1059 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 VSTM1Q6UX27 236 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 H2AFVQ71UI9 128 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 MON1BQ7L1V2 547 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 PIGZQ86VD9 579 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 ERICH1Q86X53 443 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 DNAAF5Q86Y56 855 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 TXLNBQ8N3L3 684 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 ZNF461Q8TAF7 563 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 CTNNBL1Q8WYA6 563 aaPredicted RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 PPP2R3CQ969Q6 453 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 CPXM1Q96SM3 734 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 KCNK16Q96T55 309 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 SMOQ99835 787 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 PACSIN1Q9BY11 444 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 MIS12Q9H081 205 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 CRISPLD1Q9H336 500 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 ZNF576Q9H609 170 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 CYP4F11Q9HBI6 524 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 LRRC4Q9HBW1 653 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 TMEM30AQ9NV96 361 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 ADAM22Q9P0K1 906 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 CYTH4Q9UIA0 394 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 NENFQ9UMX5 172 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 SLC27A5Q9Y2P5 690 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 REXO2Q9Y3B8 237 aaKnown RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 YIPF1Q9Y548 306 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 PCDHA13Q9Y5I0 950 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 ADGRG1Q9Y653 693 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 TMEM265A0A087WTH1 108 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 GOLGA8SH3BPF8 625 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ZSCAN12O43309 604 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 TGM5O43548 720 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 BEST1O76090 585 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ABLIM3O94929 683 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 SEC24AO95486 1093 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ERBB2P04626 1255 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 SPATA31D3P0C874 917 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 MYBL1P10243 752 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 LCP1P13796 627 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ATF2P15336 505 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ACADSBP45954 432 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ALDH1A3P47895 512 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 NRIP1P48552 1158 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 TUFMP49411 452 aaKnown RBP8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 VAV2P52735 878 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 SLC5A3P53794 718 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 GALCP54803 685 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 VEPH1Q14D04 833 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 C10orf76Q5T2E6 689 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 SDHAF4Q5VUM1 108 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 PMF1Q6P1K2 205 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 LLGL2Q6P1M3 1020 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 DNAJC24Q6P3W2 148 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ELMSAN1Q6PJG2 1045 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 SPATA31D4Q6ZUB0 917 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 CCDC149Q6ZUS6 474 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 GPRIN1Q7Z2K8 1008 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 PHLDB2Q86SQ0 1253 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 RBM23Q86U06 439 aaKnown RBP8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 PHF13Q86YI8 300 aaPredicted RBP8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 MCOLN2Q8IZK6 566 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 WDTC1Q8N5D0 677 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 STKLD1Q8NE28 680 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ZMIZ2Q8NF64 920 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 SLC7A14Q8TBB6 771 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 GPR152Q8TDT2 470 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 SLC35F5Q8WV83 523 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 C18orf8Q96DM3 657 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 MRPL38Q96DV4 380 aaKnown RBP8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 HSFY1Q96LI6 401 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 C8orf48Q96LL4 319 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 THAP2Q9H0W7 228 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 PRDM12Q9H4Q4 367 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 TLE6Q9H808 572 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 CSNK1G1Q9HCP0 422 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 PNPLA8Q9NP80 782 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 MYO1AQ9UBC5 1043 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 TJP2Q9UDY2 1190 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 FBXW11Q9UKB1 542 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 STRIP2Q9ULQ0 834 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 MAFFQ9ULX9 164 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 ZKSCAN5Q9Y2L8 839 aa8.34□□□□□ -1.07
HMGA1P4-201ENST00000428643 PPP2R2CQ9Y2T4 447 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms