RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 MAFFQ9ULX9 164 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 EFR3BQ9Y2G0 817 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 CENPFP49454 3210 aa9.55□□□□□ -0.88
NR1I3-209ENST00000428574 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 B4GALT3O60512 393 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 HSF2BPO75031 334 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 KRT7P08729 469 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 CCDC130P13994 396 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 CSF2RAP15509 400 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 MCM3P25205 808 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
NR1I3-209ENST00000428574 BRCC3P46736 316 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 SLC11A1P49279 550 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 BCAR1P56945 870 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 CREMQ03060 361 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 FPGSQ05932 587 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 FAM102AQ5T9C2 384 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-209ENST00000428574 SEL1L2Q5TEA6 688 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 CCDC70Q6NSX1 233 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 FUT10Q6P4F1 479 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 CLEC20AQ6ZU45 233 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 PAQR9Q6ZVX9 377 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 DNAAF5Q86Y56 855 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 PSTKQ8IV42 348 aaKnown RBP9.54□□□□□ -0.88
NR1I3-209ENST00000428574 MMGT1Q8N4V1 131 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
NR1I3-209ENST00000428574 EXD1Q8NHP7 514 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 UBA3Q8TBC4 463 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 SPPL2BQ8TCT7 592 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 PCED1BQ96HM7 432 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
NR1I3-209ENST00000428574 ZNF558Q96NG5 402 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 RUNDC3BQ96NL0 473 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 TBCBQ99426 244 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 CARD6Q9BX69 1037 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 CWH43Q9H720 699 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 PRDM16Q9HAZ2 1276 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 COMMD8Q9NX08 183 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 MARCH5Q9NX47 278 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 DNAJB4Q9UDY4 337 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
NR1I3-209ENST00000428574 COL4A4P53420 1690 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 GOLGA6L10A0A0M3HER8 536 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 TRIM66O15016 1216 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 NCK2O43639 380 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 TBC1D4O60343 1298 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 AP1G2O75843 785 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 RNF8O76064 485 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 ITGB1P05556 798 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 GPD1P21695 349 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 ADORA2BP29275 332 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 RFC1P35251 1148 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 AIF1P55008 147 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 RPL7AP62424 266 aaKnown RBP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 HTRA4P83105 476 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 USP41Q3LFD5 358 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 SLC8B1Q6J4K2 584 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 FAM183BPQ6ZVS7 135 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 SIX6OS1Q8N1H7 587 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 OR10T2Q8NGX3 314 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 TEKT4Q8WW24 435 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 UBXN4Q92575 508 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 ALG3Q92685 438 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 MYLPFQ96A32 169 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 C8orf48Q96LL4 319 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 RNPC3Q96LT9 517 aaKnown RBP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 SLC9A7Q96T83 725 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 TTPALQ9BTX7 342 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 LRRC4Q9HBW1 653 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 PRDM5Q9NQX1 630 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 ST7Q9NRC1 585 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 HOMER3Q9NSC5 361 aa9.53□□□□□ -0.88
NR1I3-209ENST00000428574 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
NR1I3-209ENST00000428574 UQCRHLA0A096LP55 91 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 MYBPHLA2RUH7 354 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 HHLA1C9JL84 531 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 ATP2C2O75185 946 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 DAB1O75553 588 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 C1RP00736 705 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 FGBP02675 491 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 SOD2P04179 222 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 UQCRHP07919 91 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 ACAT1P24752 427 aaKnown RBP9.52□□□□□ -0.89
NR1I3-209ENST00000428574 PSMA2P25787 234 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 SDC4P31431 198 aa9.52□□□□□ -0.89
NR1I3-209ENST00000428574 MATKP42679 507 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms