RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 TNFRSF10BO14763 440 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 P4HA2O15460 535 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 AP1G2O75843 785 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 AVPR2P30518 371 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 GDI1P31150 447 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 RAD23BP54727 409 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 PFKPQ01813 784 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 LRMPQ12912 555 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 CUL2Q13617 745 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 SLC44A4Q53GD3 710 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 ZNF394Q53GI3 561 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 ASTLQ6HA08 431 aaPredicted RBP17.71■□□□□ 0.43
VRK2-204ENST00000428021 UBR7Q8N806 425 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 SLC4A11Q8NBS3 891 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 CYFIP2Q96F07 1278 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 SLC22A12Q96S37 553 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 MFSD1Q9H3U5 465 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 FAM124BQ9H5Z6 455 aaPredicted RBP17.71■□□□□ 0.43
VRK2-204ENST00000428021 DMAP1Q9NPF5 467 aaPredicted RBP17.71■□□□□ 0.43
VRK2-204ENST00000428021 OBP2AQ9NY56 170 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 IL37Q9NZH6 218 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.71■□□□□ 0.43
VRK2-204ENST00000428021 COL4A2P08572 1712 aa17.71■□□□□ 0.43
VRK2-204ENST00000428021 ARNTLO00327 626 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 PI15O43692 258 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 AFPP02771 609 aaKnown RBP17.7■□□□□ 0.42
VRK2-204ENST00000428021 CCDC192P0DO97 292 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 CLCN5P51795 746 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 STARD6P59095 220 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 FCHO2Q0JRZ9 810 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 NUP93Q8N1F7 819 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 TTC39CQ8N584 583 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 TMEM105Q8N8V8 129 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 FLCNQ8NFG4 579 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 SCAMP5Q8TAC9 235 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 USP13Q92995 863 aaPredicted RBP17.7■□□□□ 0.42
VRK2-204ENST00000428021 CNOT6LQ96LI5 555 aaKnown RBP17.7■□□□□ 0.42
VRK2-204ENST00000428021 BRD9Q9H8M2 597 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 TBC1D17Q9HA65 648 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 GCNT4Q9P109 453 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 CCL26Q9Y258 94 aa17.7■□□□□ 0.42
VRK2-204ENST00000428021 C2orf78A6NCI8 922 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 ZNF840PA6NDX5 716 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 SHISA7A6NL88 538 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 ERCC5P28715 1186 aaPredicted RBP17.69■□□□□ 0.42
VRK2-204ENST00000428021 ADORA2BP29275 332 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 MAP3K7CLP57077 242 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 TAF10Q12962 218 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 MLF2Q15773 248 aaPredicted RBP17.69■□□□□ 0.42
VRK2-204ENST00000428021 PPP1R26Q5T8A7 1209 aaPredicted RBP17.69■□□□□ 0.42
VRK2-204ENST00000428021 PHLDB3Q6NSJ2 640 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 EHBP1Q8NDI1 1231 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 RIN3Q8TB24 985 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 DNASE1L2Q92874 299 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 TMEM176AQ96HP8 235 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 CYP2S1Q96SQ9 504 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 DDX23Q9BUQ8 820 aaKnown RBP17.69■□□□□ 0.42
VRK2-204ENST00000428021 TRPV5Q9NQA5 729 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 EHD2Q9NZN4 543 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 PATJQ8NI35 1801 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 MUC6Q6W4X9 2439 aa17.69■□□□□ 0.42
VRK2-204ENST00000428021 KIF26AQ9ULI4 1882 aaPredicted RBP17.69■□□□□ 0.42
VRK2-204ENST00000428021 TICRRQ7Z2Z1 1910 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 HHLA1C9JL84 531 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 DPYSL4O14531 572 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 ZNF263O14978 683 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 CHADO15335 359 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 RTN3O95197 1032 aaPredicted RBP17.68■□□□□ 0.42
VRK2-204ENST00000428021 YWHAQP27348 245 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 AVPR1AP37288 418 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 SLC5A3P53794 718 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 PRKCQQ04759 706 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 ZNF268Q14587 947 aaPredicted RBP17.68■□□□□ 0.42
VRK2-204ENST00000428021 CLEC20AQ6ZU45 233 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 CELF5Q8N6W0 485 aaKnown RBP17.68■□□□□ 0.42
VRK2-204ENST00000428021 IRF7Q92985 503 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 KAT5Q92993 513 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 HEXIM2Q96MH2 286 aaKnown RBP17.68■□□□□ 0.42
VRK2-204ENST00000428021 NT5C1BQ96P26 610 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 TRPC7Q9HCX4 862 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 HEBP1Q9NRV9 189 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 TDP1Q9NUW8 608 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 TRPM5Q9NZQ8 1165 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 HCN4Q9Y3Q4 1203 aa17.68■□□□□ 0.42
VRK2-204ENST00000428021 F5P12259 2224 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 TRAV19A0A0A6YYK7 116 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 FAM92AA1XBS5 289 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 FAM200BP0CF97 657 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 TRIM21P19474 475 aaKnown RBP17.67■□□□□ 0.42
VRK2-204ENST00000428021 AOC1P19801 751 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 ACO1P21399 889 aaKnown RBP17.67■□□□□ 0.42
VRK2-204ENST00000428021 TBXAS1P24557 533 aaPredicted RBP17.67■□□□□ 0.42
VRK2-204ENST00000428021 PPP3CCP48454 512 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 CETN1Q12798 172 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 IFRD2Q12894 506 aaPredicted RBP17.67■□□□□ 0.42
VRK2-204ENST00000428021 GPRIN1Q7Z2K8 1008 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 ARHGEF19Q8IW93 802 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 ARL14EPQ8N8R7 260 aaPredicted RBP17.67■□□□□ 0.42
VRK2-204ENST00000428021 BPIFB1Q8TDL5 484 aa17.67■□□□□ 0.42
VRK2-204ENST00000428021 SHDQ96IW2 340 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms