RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SKOR1P84550 965 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 CCDC85BQ15834 202 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 TRAPPC11Q7Z392 1133 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 PI4K2AQ9BTU6 479 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 DDX43Q9NXZ2 648 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 PAK5Q9P286 719 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 KPNA3O00505 521 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 TSPAN3O60637 253 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 ERN1O75460 977 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 SPRP35270 261 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 MTA1Q13330 715 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 ACOX1Q15067 660 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 PABPC1LQ4VXU2 614 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 BEND6Q5SZJ8 279 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 INTS5Q6P9B9 1019 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 EFL1Q7Z2Z2 1120 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 CATSPER3Q86XQ3 398 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 REM2Q8IYK8 340 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 MYO1HQ8N1T3 1032 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 PPP1R14AQ96A00 147 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 TRIM9Q9C026 710 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 KRCC1Q9NPI7 259 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 XPO7Q9UIA9 1087 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 WNT10BO00744 389 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 NCAM2O15394 837 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 PPP4CP60510 307 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 SNCBQ16143 134 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 CLEC16AQ2KHT3 1053 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 TFB1MQ8WVM0 346 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 CCSER1Q9C0I3 900 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 KIAA1257Q9ULG3 409 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 FAM187AA6NFU0 413 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 IL10P22301 178 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 RENBPP51606 427 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 FBXO47Q5MNV8 452 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 SPATA31D1Q6ZQQ2 1576 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 PLEKHM3Q6ZWE6 761 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 BBS7Q8IWZ6 715 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 NUP93Q8N1F7 819 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 CYFIP2Q96F07 1278 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 MTMR12Q9C0I1 747 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 ASAH2Q9NR71 780 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 SOHLH2Q9NX45 425 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 ZFP69BQ9UJL9 534 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 USP32Q8NFA0 1604 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 MYO1GB0I1T2 1018 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 TEX33O43247 280 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 RTN3O95197 1032 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 ADH1AP07327 375 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 PRKAR2AP13861 404 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 AMD1P17707 334 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 KRT4P19013 534 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 KLRK1P26718 216 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 MRPS25P82663 173 aaKnown RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 DAB2P98082 770 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 ZNF677Q86XU0 584 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 ATP8B4Q8TF62 1192 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 FAM161BQ96MY7 647 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 ADAM2Q99965 735 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 SYT15Q9BQS2 421 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 PHF20Q9BVI0 1012 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 SNTG2Q9NY99 539 aa10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 TIMM13Q9Y5L4 95 aaPredicted RBP10.32□□□□□ -0.76
CLTCL1-202ENST00000427926 KRT16P08779 473 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 VDRP11473 427 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 SLC16A1P53985 500 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 NCAPHQ15003 741 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 SMTNL2Q2TAL5 461 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 EMBQ6PCB8 327 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 DOK6Q6PKX4 331 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 DDX42Q86XP3 938 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 HPS3Q969F9 1004 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 DMAP1Q9NPF5 467 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 EVPLLA8MZ36 301 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 MSH4O15457 936 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 BMP10O95393 424 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 CRTAMO95727 393 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 MMEP08473 750 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 MYL2P10916 166 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 YWHAQP27348 245 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 PRIM2P49643 509 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 ORC1Q13415 861 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 BOLA3Q53S33 107 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 PCNX4Q63HM2 1172 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 FBXL19Q6PCT2 694 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 C11orf74Q86VG3 221 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 C1orf131Q8NDD1 294 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 BPIFA3Q9BQP9 254 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 DCLK3Q9C098 648 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 KIAA1683Q9H0B3 1180 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 NFKBIL1Q9UBC1 381 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 TRIM16O95361 564 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 CYP2A6P11509 494 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 CDH2P19022 906 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 PTPN7P35236 360 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 SERPINB9P50453 376 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 CLCN6P51797 869 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 ARFIP2P53365 341 aa10.31□□□□□ -0.76
CLTCL1-202ENST00000427926 CENPCQ03188 943 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms