RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 SATB1Q01826 763 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 KRT17Q04695 432 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 LAMB3Q13751 1172 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 ZNF267Q14586 743 aaPredicted RBP4.37□□□□□ -1.71
LINC02541-201ENST00000427157 LY6KQ17RY6 165 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 ZNF260Q3ZCT1 412 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 ATAT1Q5SQI0 421 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 PXDC1Q5TGL8 231 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 MTHFD1LQ6UB35 978 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 SERPINA13PQ6UXR4 307 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 CAND1Q86VP6 1230 aaKnown RBP4.37□□□□□ -1.71
LINC02541-201ENST00000427157 ABRAQ8N0Z2 381 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 PRSS3P2Q8NHM4 247 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 PRR25Q96S07 402 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 DPCDQ9BVM2 203 aaPredicted RBP4.37□□□□□ -1.71
LINC02541-201ENST00000427157 TCF7L1Q9HCS4 588 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 HOMER2Q9NSB8 354 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 SCAF8Q9UPN6 1271 aaKnown RBP4.37□□□□□ -1.71
LINC02541-201ENST00000427157 AFG3L2Q9Y4W6 797 aa4.37□□□□□ -1.71
LINC02541-201ENST00000427157 A0A087WWL8 130 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 UBE2Q2LH0YL09 131 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 MYO1CO00159 1063 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 AP4M1O00189 453 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 PRKCBP05771 671 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 CYP2C9P11712 490 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 KCNA3P22001 575 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 IL1R2P27930 398 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 PLCD1P51178 756 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 NEK2P51955 445 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 DGKEP52429 567 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 LRRC41Q15345 812 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 BCDIN3DQ7Z5W3 292 aaKnown RBP4.36□□□□□ -1.71
LINC02541-201ENST00000427157 IZUMO1Q8IYV9 350 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 NANOGP1Q8N7R0 232 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 DNAJC5GQ8N7S2 189 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 MMS19Q96T76 1030 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 TMEM79Q9BSE2 394 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 SLC12A5Q9H2X9 1139 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 CNNM1Q9NRU3 951 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 ASIC5Q9NY37 505 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 IP6K2Q9UHH9 426 aa4.36□□□□□ -1.71
LINC02541-201ENST00000427157 A0A088AWK7 358 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 FCHO1O14526 889 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 IGSF3O75054 1194 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 THP07101 528 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 VCAM1P19320 739 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 POLGP54098 1239 aaPredicted RBP4.35□□□□□ -1.71
LINC02541-201ENST00000427157 ZNF268Q14587 947 aaPredicted RBP4.35□□□□□ -1.71
LINC02541-201ENST00000427157 FAM187BQ17R55 369 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 MGAT5BQ3V5L5 792 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 ZNF517Q6ZMY9 492 aaPredicted RBP4.35□□□□□ -1.71
LINC02541-201ENST00000427157 GAS2L3Q86XJ1 694 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 SLC15A4Q8N697 577 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 NRACQ8N912 160 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 PIGOQ8TEQ8 1089 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 TMEM171Q8WVE6 324 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 C1GALT1C1Q96EU7 318 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 FAM118BQ9BPY3 351 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 EFHD1Q9BUP0 239 aa4.35□□□□□ -1.71
LINC02541-201ENST00000427157 TRMT13Q9NUP7 481 aaKnown RBP4.35□□□□□ -1.71
LINC02541-201ENST00000427157 PIH1D1Q9NWS0 290 aaKnown RBP4.35□□□□□ -1.71
LINC02541-201ENST00000427157 SOCS2O14508 198 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 OFD1O75665 1012 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 XRCC6P12956 609 aaKnown RBP eCLIP4.34□□□□□ -1.71
LINC02541-201ENST00000427157 NPR1P16066 1061 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 ARFIP2P53365 341 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 PRKAG1P54619 331 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 PSG6Q00889 435 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 FGL2Q14314 439 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 MLC1Q15049 377 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 PLA1AQ53H76 456 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 IFIT1BQ5T764 474 aaKnown RBP4.34□□□□□ -1.71
LINC02541-201ENST00000427157 MEX3CQ5U5Q3 659 aaKnown RBP4.34□□□□□ -1.71
LINC02541-201ENST00000427157 LMBRD2Q68DH5 695 aaPredicted RBP4.34□□□□□ -1.71
LINC02541-201ENST00000427157 SHC4Q6S5L8 630 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 ZNF813Q6ZN06 617 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 BPIFB1Q8TDL5 484 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 DIS3LQ8TF46 1054 aaKnown RBP4.34□□□□□ -1.71
LINC02541-201ENST00000427157 HOOK2Q96ED9 719 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 NT5C1BQ96P26 610 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 C17orf80Q9BSJ5 609 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 TRIM54Q9BYV2 358 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 ANKRD6Q9Y2G4 727 aa4.34□□□□□ -1.71
LINC02541-201ENST00000427157 ADAM10O14672 748 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 INSIG1O15503 277 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 ABLIM3O94929 683 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 FGAP02671 866 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 FGBP02675 491 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 MYCLP12524 364 aaPredicted RBP4.33□□□□□ -1.72
LINC02541-201ENST00000427157 CRELD2Q6UXH1 353 aaPredicted RBP4.33□□□□□ -1.72
LINC02541-201ENST00000427157 ZNF783Q6ZMS7 281 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 DENND1CQ8IV53 801 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 SIRT6Q8N6T7 355 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 KBTBD7Q8WVZ9 684 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 RAPGEF4Q8WZA2 1011 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 WASF1Q92558 559 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 COQ8BQ96D53 544 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 RSPRY1Q96DX4 576 aa4.33□□□□□ -1.72
LINC02541-201ENST00000427157 FYTTD1Q96QD9 318 aaKnown RBP4.33□□□□□ -1.72
LINC02541-201ENST00000427157 MS4A7Q9GZW8 240 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms