RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ERP44Q9BS26 406 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 AIPL1Q9NZN9 384 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 CHMP2BQ9UQN3 213 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 PKP3Q9Y446 797 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 AFDNP55196 1824 aaKnown RBP14.44□□□□□ -0.1
RPL28-202ENST00000426763 GFAPP14136 432 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 ZNF200P98182 395 aaPredicted RBP14.44□□□□□ -0.1
RPL28-202ENST00000426763 ANGPTL8Q6UXH0 198 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 ARHGEF19Q8IW93 802 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 UNC45BQ8IWX7 931 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 IL17RAQ96F46 866 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 UROC1Q96N76 676 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 DMAP1Q9NPF5 467 aaPredicted RBP14.44□□□□□ -0.1
RPL28-202ENST00000426763 SMARCAL1Q9NZC9 954 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 SLC25A13Q9UJS0 675 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 USP18Q9UMW8 372 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 NFKBIEO00221 500 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 KCNJ1P48048 391 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 OXCT1P55809 520 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 C9orf72Q96LT7 481 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 FUCA2Q9BTY2 467 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 EML4Q9HC35 981 aaKnown RBP14.44□□□□□ -0.1
RPL28-202ENST00000426763 XAB2Q9HCS7 855 aaKnown RBP14.44□□□□□ -0.1
RPL28-202ENST00000426763 TFR2Q9UP52 801 aa14.44□□□□□ -0.1
RPL28-202ENST00000426763 LOC102724159A0A0B4J2E5 919 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 SFSWAPQ12872 951 aaKnown RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 PWP2Q15269 919 aaKnown RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 SH3BP5LQ7L8J4 393 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 FAM131BQ86XD5 332 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 CARNMT1Q8N4J0 409 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 GIPC2Q8TF65 315 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 RIN2Q8WYP3 895 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 ELMO2Q96JJ3 720 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 CENPKQ9BS16 269 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 PDGFDQ9GZP0 370 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 BAZ2BQ9UIF8 2168 aaKnown RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 A0A1B0GUA9 196 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 ITGA8P53708 1063 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 MCL1Q07820 350 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 USP10Q14694 798 aaKnown RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 GBP7Q8N8V2 638 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 DDI1Q8WTU0 396 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 INPP4AQ96PE3 977 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 TRABDQ9H4I3 376 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 MLXIPLQ9NP71 852 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 CDH16O75309 829 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 SPAG7O75391 227 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 SPRP35270 261 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 ZNF268Q14587 947 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 KCNT1Q5JUK3 1230 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 PACSIN1Q9BY11 444 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 FAM129AQ9BZQ8 928 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 PSMC3IPQ9P2W1 217 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 RTN3O95197 1032 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 PYGLP06737 847 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 KITP10721 976 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 CRYBB1P53674 252 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 E2F5Q15329 346 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 TBCCQ15814 346 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 KIAA0319LQ8IZA0 1049 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 FARP2O94887 1054 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 TUFMP49411 452 aaKnown RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 CAPSQ13938 189 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 LBRQ14739 615 aaKnown RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 GJC2Q5T442 439 aaPredicted RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 TBC1D19Q8N5T2 526 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 TMEM161BQ8NDZ6 487 aa14.43□□□□□ -0.1
RPL28-202ENST00000426763 THOC1Q96FV9 657 aaKnown RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 TGS1Q96RS0 853 aaKnown RBP14.43□□□□□ -0.1
RPL28-202ENST00000426763 SPECC1L-ADORA2AF8WAN1 911 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 AGTP01019 485 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 IL1RL1Q01638 556 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 PTK6Q13882 451 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 PTRHD1Q6GMV3 140 aaKnown RBP14.42□□□□□ -0.1
RPL28-202ENST00000426763 MFN1Q8IWA4 741 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 CAPNS2Q96L46 248 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 HSD17B14Q9BPX1 270 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 SMG5Q9UPR3 1016 aaKnown RBP14.42□□□□□ -0.1
RPL28-202ENST00000426763 IPPQ9Y573 584 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 ORC6Q9Y5N6 252 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 FAM237AA0A1B0GTK4 181 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 MICAL2O94851 1124 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 RHOCP08134 193 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 CCR1P32246 355 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 MLH1P40692 756 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 MAGEA4P43358 317 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 SCNN1GP51170 649 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 MDM2Q00987 491 aaPredicted RBP14.42□□□□□ -0.1
RPL28-202ENST00000426763 FUT2Q10981 343 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 MCOLN2Q8IZK6 566 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 MMGT1Q8N4V1 131 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 EMC1Q8N766 993 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 UPF1Q92900 1129 aaKnown RBP eCLIP14.42□□□□□ -0.13e-7■■■■■ 30
RPL28-202ENST00000426763 GPATCH2LQ9NWQ4 482 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 ARHGAP20Q9P2F6 1191 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 AAR2Q9Y312 384 aaKnown RBP14.42□□□□□ -0.1
RPL28-202ENST00000426763 SNCAIPQ9Y6H5 919 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 COL1A2P08123 1366 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 RTP1P59025 263 aa14.42□□□□□ -0.1
RPL28-202ENST00000426763 ADIGQ0VDE8 80 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms