RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 FGFR1P11362 822 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 GJB2P29033 226 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 TOB1P50616 345 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 PDIA5Q14554 519 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 MXD4Q14582 209 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 EMC2Q15006 297 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 DUSP6Q16828 381 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 SYCE2Q6PIF2 218 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 SRGAP1Q7Z6B7 1085 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 FERMT3Q86UX7 667 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 ABI1Q8IZP0 508 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 ZNF513Q8N8E2 541 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 C4orf32Q8N8J7 132 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 ERMNQ8TAM6 284 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 PSPC1Q8WXF1 523 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 RCC1LQ96I51 464 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 TBC1D32Q96NH3 1257 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 CASD1Q96PB1 797 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 BBC3Q96PG8 261 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 CDCA3Q99618 268 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 POLR3CQ9BUI4 534 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 DUSP23Q9BVJ7 150 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 MKRN2Q9H000 416 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 TMEM117Q9H0C3 514 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 GBP3Q9H0R5 595 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 CWH43Q9H720 699 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 TUFT1Q9NNX1 390 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 PRR13Q9NZ81 148 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 WHRNQ9P202 907 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 LRWD1Q9UFC0 647 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 DBR1Q9UK59 544 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 SMC3Q9UQE7 1217 aa6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 SMG1Q96Q15 3661 aaKnown RBP6.81□□□□□ -1.32
NIF3L1-207ENST00000426253 MYH9P35579 1960 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 A0A1W2PQU0 124 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 NARSO43776 548 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 ZNF623O75123 536 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 PPM1BO75688 479 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 WEE2P0C1S8 567 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 FAM153BP0C7A2 387 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 HOXB8P17481 243 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 RPA1P27694 616 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 HOXA11P31270 313 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 ARL2P36404 184 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 RARRES1P49788 294 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 POU5F1BQ06416 359 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 NCBP1Q09161 790 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 CDK5R2Q13319 367 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 TFDP1Q14186 410 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 ZNF528Q3MIS6 628 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 LONRF3Q496Y0 759 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 TWF2Q6IBS0 349 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 OGFOD3Q6PK18 319 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 LRRC55Q6ZSA7 311 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 FAM214BQ7L5A3 538 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 MAEAQ7L5Y9 396 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 KIAA0907Q7Z7F0 614 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 CD163Q86VB7 1156 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 MAML2Q8IZL2 1156 aaPredicted RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 TOP6BLQ8N6T0 577 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 RNF149Q8NC42 400 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 EVPLQ92817 2033 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 PGBD4Q96DM1 585 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 MINDY3Q9H8M7 445 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 XPNPEP1Q9NQW7 623 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 SEMA4GQ9NTN9 838 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 PUF60Q9UHX1 559 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 PIN4Q9Y237 131 aaKnown RBP6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 ZNF451Q9Y4E5 1061 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 PCDHB6Q9Y5E3 794 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 KIAA1671Q9BY89 1806 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 LOC400499M0QZD8 3231 aa6.8□□□□□ -1.32
NIF3L1-207ENST00000426253 PLXNA4Q9HCM2 1894 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 INO80B-WBP1J3KQ70 363 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 LAD1O00515 517 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 SHOXO15266 292 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 ARHGAP6O43182 974 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 OFD1O75665 1012 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 FGF18O76093 207 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 ERLIN2O94905 339 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 KCNK5O95279 499 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 LAG3P18627 525 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 MUTP22033 750 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 GLRA2P23416 452 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 CCT6AP40227 531 aaKnown RBP6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 MTHFRP42898 656 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 CHRNA4P43681 627 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 RAB27AP51159 221 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 PTENP60484 403 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 KRT17Q04695 432 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 HSP90AA2PQ14568 343 aaPredicted RBP6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 PCBP1Q15365 356 aaKnown RBP eCLIP6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 CCDC6Q16204 474 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 COL28A1Q2UY09 1125 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 AASDHQ4L235 1098 aaPredicted RBP6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 RILPL1Q5EBL4 403 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 CLLU1OSQ5K130 101 aa6.79□□□□□ -1.32
NIF3L1-207ENST00000426253 KCNT2Q6UVM3 1135 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms