RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 CDR2Q01850 454 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 CCDC142Q17RM4 750 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 DENND5BQ6ZUT9 1274 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 MSANTD4Q8NCY6 345 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 PSMG2Q969U7 264 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 RIPOR3Q96MK2 946 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 MIS12Q9H081 205 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 FBXO44Q9H4M3 255 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 UBE2ZQ9H832 354 aaPredicted RBP25.47■■□□□ 1.67
APOE-202ENST00000425718 CD207Q9UJ71 328 aa25.47■■□□□ 1.67
APOE-202ENST00000425718 DENND4CQ5VZ89 1909 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.46■■□□□ 1.67
APOE-202ENST00000425718 MFAP3LO75121 409 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 PTPN2P17706 415 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 MTHFRP42898 656 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 PLA2G4AP47712 749 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 MAP3K7CLP57077 242 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 ARID5AQ03989 594 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 KLHL30Q0D2K2 578 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 TBX2Q13207 712 aaPredicted RBP25.46■■□□□ 1.67
APOE-202ENST00000425718 ARID5BQ14865 1188 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 NUP93Q8N1F7 819 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 TTC9BQ8N6N2 239 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 TMEM35BQ8NCS4 154 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 STK32AQ8WU08 396 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 SMG7Q92540 1137 aaKnown RBP25.46■■□□□ 1.67
APOE-202ENST00000425718 HSFY1Q96LI6 401 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 NECTIN4Q96NY8 510 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 SMOQ99835 787 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 ADAM7Q9H2U9 754 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 CLEC1BQ9P126 229 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 FAM50BQ9Y247 325 aa25.46■■□□□ 1.67
APOE-202ENST00000425718 MYO16Q9Y6X6 1858 aa25.45■■□□□ 1.67
APOE-202ENST00000425718 TBX10O75333 385 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 SERPING1P05155 500 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 ATF6P18850 670 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 HNRNPH3P31942 346 aaKnown RBP25.45■■□□□ 1.66
APOE-202ENST00000425718 ACADSBP45954 432 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 DDR2Q16832 855 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 PUS10Q3MIT2 529 aaKnown RBP25.45■■□□□ 1.66
APOE-202ENST00000425718 PKDCCQ504Y2 493 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 ATAT1Q5SQI0 421 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 RARS2Q5T160 578 aaKnown RBP25.45■■□□□ 1.66
APOE-202ENST00000425718 IRF2BP2Q7Z5L9 587 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 GPR149Q86SP6 731 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 TTC30AQ86WT1 665 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 PPM1EQ8WY54 764 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 TRMT2BQ96GJ1 504 aaKnown RBP25.45■■□□□ 1.66
APOE-202ENST00000425718 MSLNLQ96KJ4 702 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 DNAJC7Q99615 494 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 AVENQ9NQS1 362 aaPredicted RBP25.45■■□□□ 1.66
APOE-202ENST00000425718 ASAH2Q9NR71 780 aa25.45■■□□□ 1.66
APOE-202ENST00000425718 ZNF197O14709 1029 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 CCL16O15467 120 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 RFPL2O75678 378 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 PPP3CCP48454 512 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 PDE4CQ08493 712 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 CYP4A22Q5TCH4 519 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 SYCE2Q6PIF2 218 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 NOP9Q86U38 636 aaKnown RBP25.44■■□□□ 1.66
APOE-202ENST00000425718 KCTD13Q8WZ19 329 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 GCNAQ96QF7 691 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 ZMYM5Q9UJ78 669 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 NOCTQ9UK39 431 aaKnown RBP25.44■■□□□ 1.66
APOE-202ENST00000425718 DOCK6Q96HP0 2047 aa25.44■■□□□ 1.66
APOE-202ENST00000425718 SLC38A8A6NNN8 435 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 LTBRP36941 435 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 RBM10P98175 930 aaKnown RBP25.43■■□□□ 1.66
APOE-202ENST00000425718 PABPC1LQ4VXU2 614 aaKnown RBP25.43■■□□□ 1.66
APOE-202ENST00000425718 TDRD12Q587J7 1177 aaKnown RBP25.43■■□□□ 1.66
APOE-202ENST00000425718 TMC5Q6UXY8 1006 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 DNAJB7Q7Z6W7 309 aaPredicted RBP25.43■■□□□ 1.66
APOE-202ENST00000425718 SMRP1Q8NCR6 262 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 SLC35F5Q8WV83 523 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 OVCA2Q8WZ82 227 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 DDX1Q92499 740 aaKnown RBP25.43■■□□□ 1.66
APOE-202ENST00000425718 SECISBP2LQ93073 1101 aaKnown RBP25.43■■□□□ 1.66
APOE-202ENST00000425718 MYRFLQ96LU7 910 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 KCNK16Q96T55 309 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 AGPAT1Q99943 283 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 ZSWIM1Q9BR11 485 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 LRRC4Q9HBW1 653 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 ACP6Q9NPH0 428 aa25.43■■□□□ 1.66
APOE-202ENST00000425718 SOAT2O75908 522 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 TNFAIP3P21580 790 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 CDH5P33151 784 aaPredicted RBP25.42■■□□□ 1.66
APOE-202ENST00000425718 GPD2P43304 727 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 AAK1Q2M2I8 961 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 PIGZQ86VD9 579 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 PDZD8Q8NEN9 1154 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 ZMIZ2Q8NF64 920 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 UBA3Q8TBC4 463 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 GIPC2Q8TF65 315 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 ZNF707Q96C28 371 aaPredicted RBP25.42■■□□□ 1.66
APOE-202ENST00000425718 SLITRK1Q96PX8 696 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 TTLL2Q9BWV7 592 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 ABHD10Q9NUJ1 306 aa25.42■■□□□ 1.66
APOE-202ENST00000425718 KCNA5P22460 613 aa25.41■■□□□ 1.66
APOE-202ENST00000425718 YWHAQP27348 245 aa25.41■■□□□ 1.66
APOE-202ENST00000425718 CDC25CP30307 473 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms