RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 GOLGA6L4A6NEF3 574 aa22.92■■□□□ 1.26
CDCP1-202ENST00000425231 ASS1P00966 412 aaKnown RBP22.92■■□□□ 1.26
CDCP1-202ENST00000425231 FAM160A1Q05DH4 1040 aa22.92■■□□□ 1.26
CDCP1-202ENST00000425231 ENPEPQ07075 957 aa22.92■■□□□ 1.26
CDCP1-202ENST00000425231 ITPRIPL2Q3MIP1 535 aa22.92■■□□□ 1.26
CDCP1-202ENST00000425231 ZC3H14Q6PJT7 736 aaKnown RBP22.92■■□□□ 1.26
CDCP1-202ENST00000425231 PAQR9Q6ZVX9 377 aa22.92■■□□□ 1.26
CDCP1-202ENST00000425231 FAM186BQ8IYM0 893 aa22.92■■□□□ 1.26
CDCP1-202ENST00000425231 ARL14EPQ8N8R7 260 aaPredicted RBP22.92■■□□□ 1.26
CDCP1-202ENST00000425231 NELL1Q92832 810 aa22.92■■□□□ 1.26
CDCP1-202ENST00000425231 TRAV19A0A0A6YYK7 116 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 OTOL1A6NHN0 477 aaPredicted RBP22.91■■□□□ 1.26
CDCP1-202ENST00000425231 HLA-DRAP01903 254 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 USP17L7P0C7H9 530 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 PSMC2P35998 433 aaKnown RBP22.91■■□□□ 1.26
CDCP1-202ENST00000425231 PPP3CAQ08209 521 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 RUNX3Q13761 415 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 GAS6Q14393 721 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 EDRF1Q3B7T1 1238 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 TRIM68Q6AZZ1 485 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 SPOPLQ6IQ16 392 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 TSSK4Q6SA08 328 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 IER2Q9BTL4 223 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 EBF3Q9H4W6 596 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 PTPRZ1P23471 2315 aaPredicted RBP22.91■■□□□ 1.26
CDCP1-202ENST00000425231 WDR87Q6ZQQ6 2873 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 CLSTN1O94985 981 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 CKMP06732 381 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 TRIM49P0CI25 452 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 TRIM49CP0CI26 452 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 P4HA1P13674 534 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 ASPAP45381 313 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 GCLMP48507 274 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 ZNF77Q15935 545 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 SPATA20Q8TB22 786 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 CHFRQ96EP1 664 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 TNIP3Q96KP6 325 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 GSDMAQ96QA5 445 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 RBM12Q9NTZ6 932 aaKnown RBP22.91■■□□□ 1.26
CDCP1-202ENST00000425231 EHD2Q9NZN4 543 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 TRPM5Q9NZQ8 1165 aa22.91■■□□□ 1.26
CDCP1-202ENST00000425231 FAM186AA6NE01 2351 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 ZNF840PA6NDX5 716 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 LMNAP02545 664 aaKnown RBP22.9■■□□□ 1.26
CDCP1-202ENST00000425231 KRT13P13646 458 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 HDCP19113 662 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 PIK3CAP42336 1068 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 PRCPP42785 496 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 MTF1Q14872 753 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 PON2Q15165 354 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 ACOT1Q86TX2 421 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 CRYBG2Q8N1P7 616 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 ZBTB44Q8NCP5 570 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 EEF2KMTQ96G04 330 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 KCNK16Q96T55 309 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 RMND1Q9NWS8 449 aa22.9■■□□□ 1.26
CDCP1-202ENST00000425231 FRYLO94915 3013 aa22.89■■□□□ 1.26
CDCP1-202ENST00000425231 TDGF1P13385 188 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 ARSAP15289 507 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 PPP3CCP48454 512 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 NDST1P52848 882 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 ZXDBP98169 803 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 USP4Q13107 963 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 CCINQ13939 588 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 LRRC32Q14392 662 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 COBLL1Q53SF7 1204 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 ZNF658Q5TYW1 1059 aaPredicted RBP22.89■■□□□ 1.25
CDCP1-202ENST00000425231 CC2D1AQ6P1N0 951 aaPredicted RBP22.89■■□□□ 1.25
CDCP1-202ENST00000425231 FAM35AQ86V20 835 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 FUKQ8N0W3 1084 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 ADSSL1Q8N142 457 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 NUP93Q8N1F7 819 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 TAS1R2Q8TE23 839 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 ERCC4Q92889 916 aaPredicted RBP22.89■■□□□ 1.25
CDCP1-202ENST00000425231 TIGD1Q96MW7 591 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 APOBEC3GQ9HC16 384 aaKnown RBP22.89■■□□□ 1.25
CDCP1-202ENST00000425231 HMGXB4Q9UGU5 601 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 ARHGAP26Q9UNA1 814 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 PCDHA5Q9Y5H7 936 aa22.89■■□□□ 1.25
CDCP1-202ENST00000425231 TCF3P15923 654 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 PFKLP17858 780 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 TAF10Q12962 218 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 PDGFRLQ15198 375 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 DGKKQ5KSL6 1271 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 UNC93AQ86WB7 457 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 SH3RF2Q8TEC5 729 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 RNF38Q9H0F5 515 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.88■■□□□ 1.25
CDCP1-202ENST00000425231 ZSCAN32Q9NX65 697 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 PCDHGA2Q9Y5H1 932 aa22.88■■□□□ 1.25
CDCP1-202ENST00000425231 TNFRSF10BO14763 440 aa22.87■■□□□ 1.25
CDCP1-202ENST00000425231 ORC1Q13415 861 aa22.87■■□□□ 1.25
CDCP1-202ENST00000425231 SPEM1Q8N4L4 309 aa22.87■■□□□ 1.25
CDCP1-202ENST00000425231 OSCP1Q8WVF1 389 aa22.87■■□□□ 1.25
CDCP1-202ENST00000425231 MED10Q9BTT4 135 aa22.87■■□□□ 1.25
CDCP1-202ENST00000425231 TMEM8AQ9HCN3 771 aa22.87■■□□□ 1.25
CDCP1-202ENST00000425231 HELZP42694 1942 aaKnown RBP22.86■■□□□ 1.25
CDCP1-202ENST00000425231 KINO60870 393 aaKnown RBP22.86■■□□□ 1.25
CDCP1-202ENST00000425231 LILRB5O75023 590 aa22.86■■□□□ 1.25
CDCP1-202ENST00000425231 OLFM2O95897 454 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms