RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PPP1R2P3Q6NXS1 205 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 CCDC80Q76M96 950 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 BANPQ8N9N5 519 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 ICA1LQ8NDH6 482 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 FBXO36Q8NEA4 188 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.79□□□□□ -0.523e-10■■□□□ 11.9
SEC61A1-202ENST00000424880 GSDMBQ8TAX9 411 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 DIS3LQ8TF46 1054 aaKnown RBP11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 EIF2AK1Q9BQI3 630 aaKnown RBP11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 C11orf70Q9BRQ4 267 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 TBCCD1Q9NVR7 557 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 IRS2Q9Y4H2 1338 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 E2F8A0AVK6 867 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 BIRC5O15392 142 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 TBC1D12O60347 775 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 LYPLA1O75608 230 aaPredicted RBP11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 GDF10P55107 478 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 ORC2Q13416 577 aaPredicted RBP11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 DCTN2Q13561 401 aaKnown RBP11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 CCNIQ14094 377 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 CTAGE3PQ8IX95 158 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 ALDH16A1Q8IZ83 802 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 PPP4R1Q8TF05 950 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 WDR83Q9BRX9 315 aaKnown RBP11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 ZBTB21Q9ULJ3 1066 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 PNMA6FA0A0J9YX94 578 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 SLITRK3O94933 977 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 CYP3A4P08684 503 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 RPA1P27694 616 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 ENTPD1P49961 510 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 GRM2Q14416 872 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 CHI3L2Q15782 390 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 CCDC92Q53HC0 331 aaPredicted RBP11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 VWA5B1Q5TIE3 1220 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 IGDCC3Q8IVU1 814 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 PALM2Q8IXS6 379 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 NEDD1Q8NHV4 660 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 RAB3IL1Q8TBN0 382 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 PPP1R36Q96LQ0 422 aa11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 ZNF512Q96ME7 567 aaPredicted RBP11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 WRAP73Q9P2S5 460 aaPredicted RBP11.79□□□□□ -0.52
SEC61A1-202ENST00000424880 ESYT2A0FGR8 921 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 TMEM150BA6NC51 233 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 CAPN14A8MX76 684 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 ZNF76P36508 570 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 ARHGAP4P98171 946 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 CAV1Q03135 178 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 HNRNPDQ14103 355 aaKnown RBP11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 ANKRD20A4Q4UJ75 823 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 ITPRIPL1Q6GPH6 555 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 PRR5LQ6MZQ0 368 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 AGR3Q8TD06 166 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 SLCO2A1Q92959 643 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 SENP6Q9GZR1 1112 aaPredicted RBP11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 PARVGQ9HBI0 331 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 GTF3C4Q9UKN8 822 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 CLEC11AQ9Y240 323 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 DNALI1O14645 258 aaPredicted RBP11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 MAGEC1O60732 1142 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 TRMUO75648 421 aaKnown RBP11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 CYP1A2P05177 515 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 CIITAP33076 1130 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 GMPRP36959 345 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 RPL5P46777 297 aaKnown RBP11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 CLK2P49760 499 aaKnown RBP11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 VAMP7P51809 220 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 VCPP55072 806 aaKnown RBP11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 HADHBP55084 474 aaKnown RBP11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 KLF1Q13351 362 aaPredicted RBP11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 HIF1AQ16665 826 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 GRAMD4Q6IC98 578 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 ZNF720Q7Z2F6 126 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 UNC45AQ9H3U1 944 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 ACSS2Q9NR19 701 aa11.78□□□□□ -0.52
SEC61A1-202ENST00000424880 F8W8V4 182 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 MSH4O15457 936 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 SRGAP2CP0DJJ0 459 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 SRGAP2BP0DMP2 458 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 IKQ13123 557 aaPredicted RBP11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 PTK7Q13308 1070 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 CNGA3Q16281 694 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 PTAR1Q7Z6K3 402 aaPredicted RBP11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 SLF2Q8IX21 1173 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 SLC15A3Q8IY34 581 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 RAVER1Q8IY67 606 aaKnown RBP11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 TUBB6Q9BUF5 446 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 TIMMDC1Q9NPL8 285 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 TAGLN3Q9UI15 199 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 STK24Q9Y6E0 443 aa11.77□□□□□ -0.52
SEC61A1-202ENST00000424880 GSTM4Q03013 218 aa11.77□□□□□ -0.53
SEC61A1-202ENST00000424880 SMTNL2Q2TAL5 461 aa11.77□□□□□ -0.53
SEC61A1-202ENST00000424880 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
SEC61A1-202ENST00000424880 MFSD7Q6UXD7 560 aa11.77□□□□□ -0.53
SEC61A1-202ENST00000424880 CENPUQ71F23 418 aa11.77□□□□□ -0.53
SEC61A1-202ENST00000424880 DEFB107AQ8IZN7 70 aa11.77□□□□□ -0.53
SEC61A1-202ENST00000424880 ZNF398Q8TD17 642 aa11.77□□□□□ -0.53
SEC61A1-202ENST00000424880 GIPC3Q8TF64 312 aa11.77□□□□□ -0.53
SEC61A1-202ENST00000424880 MPHOSPH6Q99547 160 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-202ENST00000424880 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms