RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 BCAR1P56945 870 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 IL1RL1Q01638 556 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 CHRNDQ07001 517 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 TOP3AQ13472 1001 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 PRPF4BQ13523 1007 aaKnown RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 FGL2Q14314 439 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 R3HDM1Q15032 1099 aaKnown RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 PPA1Q15181 289 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ANKRD1Q15327 319 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 CNGA2Q16280 664 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 UGT8Q16880 541 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 TMEM266Q2M3C6 531 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 HS1BP3Q53T59 392 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ZMAT1Q5H9K5 638 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 C1orf141Q5JVX7 400 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF362Q5T0B9 420 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 FBXO38Q6PIJ6 1188 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 DPP8Q6V1X1 898 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 KCNK18Q7Z418 384 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 SLFN11Q7Z7L1 901 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 HERC6Q8IVU3 1022 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 THNSL1Q8IYQ7 743 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 TBC1D21Q8IYX1 336 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ATP11CQ8NB49 1132 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 MOSPD2Q8NHP6 518 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 Q8TCH9 128 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 STT3BQ8TCJ2 826 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 BRSK1Q8TDC3 778 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 TBC1D22AQ8WUA7 517 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 MAML1Q92585 1016 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 RGMAQ96B86 450 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 EID2BQ96D98 161 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 CALML4Q96GE6 196 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 RBM18Q96H35 190 aaKnown RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 WWC2-AS2Q96NR7 200 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 GNRHR2Q96P88 292 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ELF4Q99607 663 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 DDX23Q9BUQ8 820 aaKnown RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 BRIP1Q9BX63 1249 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 CARD11Q9BXL7 1154 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 PDCL3Q9H2J4 239 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ZMAT3Q9HA38 289 aaKnown RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 RXFP3Q9NSD7 469 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ADPRHL2Q9NX46 363 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 HOXC10Q9NYD6 342 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 MORF4L1Q9UBU8 362 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 CHORDC1Q9UHD1 332 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 EIF2B4Q9UI10 523 aaKnown RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 FBXL5Q9UKA1 691 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 TBX20Q9UMR3 447 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 ANGPTL3Q9Y5C1 460 aa4.04□□□□□ -1.76
SF3B1-205ENST00000424674 CFAP20Q9Y6A4 193 aaKnown RBP4.04□□□□□ -1.76
SF3B1-205ENST00000424674 A0A1W2PPL8 197 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CCDC154A6NI56 674 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF561-AS1K7EIQ3 104 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CAPN9O14815 690 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 IPO8O15397 1037 aaKnown RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 KIF1CO43896 1103 aaKnown RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 FAM155BO75949 473 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 APBB3O95704 486 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 FSHBP01225 129 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 FTLP02792 175 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CSH1P0DML2 217 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CSH2P0DML3 217 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 RARBP10826 455 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 LAG3P18627 525 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 SLC9A1P19634 815 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 FGFR2P21802 821 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 PTGS1P23219 599 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 PSMA4P25789 261 aaKnown RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 MAPK3P27361 379 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 AOAHP28039 575 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CST5P28325 142 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 EEF1DP29692 281 aaKnown RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 SLC7A1P30825 629 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 MLH1P40692 756 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ETV4P43268 484 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CD151P48509 253 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 MCM2P49736 904 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 NLRP5P59047 1200 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 RAC3P60763 192 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 IRX3P78415 501 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 LACTBP83111 547 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 IRF9Q00978 393 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 MC1RQ01726 317 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 MAP2K1Q02750 393 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CREB5Q02930 508 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ZBTB16Q05516 673 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 LRMPQ12912 555 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 EPS8Q12929 822 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 MAMLD1Q13495 774 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 SLC12A1Q13621 1099 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 COG2Q14746 738 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 C2orf76Q3KRA6 126 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 WDR72Q3MJ13 1102 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ANKDD1AQ495B1 522 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 CTXN3Q4LDR2 81 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 SPDYAQ5MJ70 313 aa4.03□□□□□ -1.76
SF3B1-205ENST00000424674 ATPAF1Q5TC12 328 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms