RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PGFP49763 221 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 ARHGAP17Q68EM7 881 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 CCDC170Q8IYT3 715 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 ANKRD52Q8NB46 1076 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 C11orf84Q9BUA3 381 aaPredicted RBP14.2□□□□□ -0.14
PRPF39-202ENST00000424478 CYP4F11Q9HBI6 524 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 NENFQ9UMX5 172 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 PCDHGC3Q9UN70 934 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 ZKSCAN5Q9Y2L8 839 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 C2orf71A6NGG8 1288 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 LILRB3O75022 631 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 ADIGQ0VDE8 80 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 ACAD10Q6JQN1 1059 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 TTC39CQ8N584 583 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 TMEM35BQ8NCS4 154 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 ZNF653Q96CK0 615 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 DUSP16Q9BY84 665 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 ADAM22Q9P0K1 906 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 GUCA1BQ9UMX6 200 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 HYOU1Q9Y4L1 999 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 NRDCO43847 1150 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 KLRC2P26717 231 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 USP46P62068 366 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 SLC8B1Q6J4K2 584 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 ERICH1Q86X53 443 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 SLC35F5Q8WV83 523 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 PPP1R13BQ96KQ4 1090 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 PRDM12Q9H4Q4 367 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 ARHGEF37A1IGU5 675 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 H7C4K7 107 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 TGM5O43548 720 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 IPO7O95373 1038 aaKnown RBP14.19□□□□□ -0.14
PRPF39-202ENST00000424478 BST2Q10589 180 aaKnown RBP14.19□□□□□ -0.14
PRPF39-202ENST00000424478 GPR17Q13304 367 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 ZNF677Q86XU0 584 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 EMC1Q8N766 993 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 KIAA1524Q8TCG1 905 aa14.19□□□□□ -0.14
PRPF39-202ENST00000424478 MAGED2Q9UNF1 606 aaPredicted RBP14.19□□□□□ -0.14
PRPF39-202ENST00000424478 OR6C75A6NL08 312 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 H3BNC9 293 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 CCDC175P0C221 793 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 BCAT1P54687 386 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 CENPCQ03188 943 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 PTP4A2Q12974 167 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 RAB30Q15771 203 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 MON1BQ7L1V2 547 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 DCP1BQ8IZD4 617 aaKnown RBP14.18□□□□□ -0.14
PRPF39-202ENST00000424478 MCOLN2Q8IZK6 566 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 MRPL43Q8N983 215 aaKnown RBP14.18□□□□□ -0.14
PRPF39-202ENST00000424478 SMARCD1Q96GM5 515 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 KLHL5Q96PQ7 755 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 IGFLR1Q9H665 355 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 COG5Q9UP83 839 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 CEP83Q9Y592 693 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 PCDHB5Q9Y5E4 795 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 C5orf67F2Z3F1 127 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 RTN2O75298 545 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 USP17L7P0C7H9 530 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 EPCAMP16422 314 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 ATF6P18850 670 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 REXO1L1PQ8IX06 675 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 APOL5Q9BWW9 433 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 CNOT8Q9UFF9 292 aaKnown RBP14.18□□□□□ -0.14
PRPF39-202ENST00000424478 CDH22Q9UJ99 828 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 NUDT5Q9UKK9 219 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 KIAA1257Q9ULG3 409 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 LPXNO60711 386 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 RFPL2O75678 378 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 LCA5LO95447 670 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 H2AFZP0C0S5 128 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 ARHGAP25P42331 645 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 RPL7AP62424 266 aaKnown RBP14.18□□□□□ -0.14
PRPF39-202ENST00000424478 OR6B2Q6IFH4 312 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 HFE2Q6ZVN8 426 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 FAM183BPQ6ZVS7 135 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 H2AFVQ71UI9 128 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 CCAR2Q8N163 923 aaKnown RBP14.18□□□□□ -0.14
PRPF39-202ENST00000424478 ISCUQ9H1K1 167 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 TTYH1Q9H313 450 aaPredicted RBP14.18□□□□□ -0.14
PRPF39-202ENST00000424478 ZNF576Q9H609 170 aa14.18□□□□□ -0.14
PRPF39-202ENST00000424478 COL4A4P53420 1690 aaPredicted RBP14.17□□□□□ -0.14
PRPF39-202ENST00000424478 TMEM110-MUSTN1A8MSY1 372 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 PAPSS1O43252 624 aaPredicted RBP14.17□□□□□ -0.14
PRPF39-202ENST00000424478 MMP8P22894 467 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 NAP1L1P55209 391 aaKnown RBP14.17□□□□□ -0.14
PRPF39-202ENST00000424478 RAB6CQ53S08 254 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 ZNF461Q8TAF7 563 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 SLC22A17Q8WUG5 538 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 PLVAPQ9BX97 442 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 RAB6CQ9H0N0 254 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 BACE2Q9Y5Z0 518 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 HHLA1C9JL84 531 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 PRRG1O14668 218 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 MOCS3O95396 460 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 TKTL1P51854 596 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 C4orf50Q6ZRC1 276 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 FMNL3Q8IVF7 1028 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 JOSD2Q8TAC2 188 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 SLC7A14Q8TBB6 771 aa14.17□□□□□ -0.14
PRPF39-202ENST00000424478 ULBP1Q9BZM6 244 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms