RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 SLC9A3R1O14745 358 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 ZIC2O95409 532 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 OLFM2O95897 454 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 LDHAP00338 332 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 ADSSP30520 456 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 MAPRE1Q15691 268 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 TRIM61Q5EBN2 209 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 C19orf48Q6RUI8 117 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 C4orf50Q6ZRC1 276 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 ZNF720Q7Z2F6 126 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 RABEPKQ7Z6M1 372 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 SPATA2LQ8IUW3 424 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 ARL14EPQ8N8R7 260 aaPredicted RBP16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 C1orf127Q8N9H9 656 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 KCNV2Q8TDN2 545 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 LINC00597Q9H2U6 94 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 TRPC7Q9HCX4 862 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 GTF3C4Q9UKN8 822 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 KLK13Q9UKR3 277 aa16.68■□□□□ 0.26
RPUSD3-204ENST00000424438 MAST4O15021 2626 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 MYOFQ9NZM1 2061 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 C2orf78A6NCI8 922 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 MYMKA6NI61 221 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 KRT18P05783 430 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 LONP1P36776 959 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 DHPSP49366 369 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 C2orf27AQ580R0 203 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 EOGTQ5NDL2 527 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 SDHAF4Q5VUM1 108 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 PROSER1Q86XN7 944 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 ADGRG2Q8IZP9 1017 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 CEP76Q8TAP6 659 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 POMGNT1Q8WZA1 660 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 LARP4BQ92615 738 aaKnown RBP16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 PIGKQ92643 395 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 FNBP1Q96RU3 617 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 POLMQ9NP87 494 aaPredicted RBP16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 PCDH15Q96QU1 1955 aa16.67■□□□□ 0.26
RPUSD3-204ENST00000424438 TISP43B9A030 160 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 CYP17A1P05093 508 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 PLCG1P19174 1290 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 GARTP22102 1010 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 TNFRSF4P43489 277 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 KIR2DL1P43626 348 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 MCM6Q14566 821 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 MAP7D1Q3KQU3 841 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 ZC2HC1CQ53FD0 456 aaPredicted RBP16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 TMEM92Q6UXU6 159 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 ADGRF2Q8IZF7 708 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 KRI1Q8N9T8 703 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 IL17RCQ8NAC3 791 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 STKLD1Q8NE28 680 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 PNKPQ96T60 521 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 TRPM5Q9NZQ8 1165 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 PILRBQ9UKJ0 227 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 AGAP1Q9UPQ3 857 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 EXOC7Q9UPT5 735 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 GPSM3Q9Y4H4 160 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 IGSF10Q6WRI0 2623 aa16.66■□□□□ 0.26
RPUSD3-204ENST00000424438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 LEFTY2O00292 366 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 CAPNS1P04632 268 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 ITGB3P05106 788 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 HNRNPLP14866 589 aaKnown RBP eCLIP16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 ENGP17813 658 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 DDIT3P35638 169 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 CDR1P51861 262 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 NOP14P78316 857 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 SIM1P81133 766 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 RBP5P82980 135 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 ZXDBP98169 803 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 TFAMQ00059 246 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 ZNF423Q2M1K9 1284 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 OSTM1Q86WC4 334 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 DDX42Q86XP3 938 aaKnown RBP eCLIP16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 OTUB2Q96DC9 234 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 CDH9Q9ULB4 789 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 SLC6A14Q9UN76 642 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 INVSQ9Y283 1065 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 WDFY3Q8IZQ1 3526 aa16.65■□□□□ 0.26
RPUSD3-204ENST00000424438 SMG1Q96Q15 3661 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 ZNF840PA6NDX5 716 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 KIAA0391O15091 583 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 KAT7O95251 611 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 ADH1CP00326 375 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 APODP05090 189 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 SERPINF2P08697 491 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 FAM163BP0C2L3 166 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 GAP43P17677 238 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 GRIA2P42262 883 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 ALCAMQ13740 583 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 DHCR24Q15392 516 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 DUOXA1Q1HG43 343 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 SOWAHAQ2M3V2 549 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 PREPLQ4J6C6 727 aaPredicted RBP16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 LYSMD4Q5XG99 296 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
RPUSD3-204ENST00000424438 SLC36A4Q6YBV0 504 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms