RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 B3GALT6Q96L58 329 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 SAMD11Q96NU1 681 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 TGS1Q96RS0 853 aaKnown RBP14.9□□□□□ -0.02
ACTN4-203ENST00000424234 RUFY1Q96T51 708 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 NAP1L3Q99457 506 aaPredicted RBP14.9□□□□□ -0.02
ACTN4-203ENST00000424234 SH3GL2Q99962 352 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 HINFPQ9BQA5 517 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 MRPL45Q9BRJ2 306 aaKnown RBP14.9□□□□□ -0.02
ACTN4-203ENST00000424234 HERC2P3Q9BVR0 1158 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 THAP2Q9H0W7 228 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 CYP3A43Q9HB55 503 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 CISHQ9NSE2 258 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 TAS2R14Q9NYV8 317 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 HMGXB4Q9UGU5 601 aa14.9□□□□□ -0.02
ACTN4-203ENST00000424234 TIMM13Q9Y5L4 95 aaPredicted RBP14.9□□□□□ -0.02
ACTN4-203ENST00000424234 ARHGEF37A1IGU5 675 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 BHMG1C9JSJ3 638 aaPredicted RBP14.89□□□□□ -0.03
ACTN4-203ENST00000424234 KRIT1O00522 736 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 DDX3YO15523 660 aaKnown RBP14.89□□□□□ -0.03
ACTN4-203ENST00000424234 HCRTO43612 131 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 SOD2P04179 222 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 GZMAP12544 262 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 CD58P19256 250 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 WARSP23381 471 aaKnown RBP14.89□□□□□ -0.03
ACTN4-203ENST00000424234 GPC5P78333 572 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 LRIT3Q3SXY7 679 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 RTP2Q5QGT7 225 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 TAS1R1Q7RTX1 841 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 DDX53Q86TM3 631 aaKnown RBP14.89□□□□□ -0.03
ACTN4-203ENST00000424234 TSEN2Q8NCE0 465 aaKnown RBP14.89□□□□□ -0.03
ACTN4-203ENST00000424234 CCDC26Q8TAB7 109 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 IFT81Q8WYA0 676 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 CARD9Q9H257 536 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 FAM124BQ9H5Z6 455 aaPredicted RBP14.89□□□□□ -0.03
ACTN4-203ENST00000424234 DSEQ9UL01 958 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 NFU1Q9UMS0 254 aa14.89□□□□□ -0.03
ACTN4-203ENST00000424234 C2orf16Q68DN1 1984 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 MIF4GDA9UHW6 222 aaKnown RBP14.88□□□□□ -0.03
ACTN4-203ENST00000424234 GABRDO14764 452 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 CILPO75339 1184 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 MTA2O94776 668 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 FTLP02792 175 aaPredicted RBP14.88□□□□□ -0.03
ACTN4-203ENST00000424234 YWHAEP62258 255 aaKnown RBP14.88□□□□□ -0.03
ACTN4-203ENST00000424234 VARS2Q5ST30 1063 aaKnown RBP14.88□□□□□ -0.03
ACTN4-203ENST00000424234 OVOS1Q6IE37 1185 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 MAATS1Q7Z4T9 603 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 SPATA18Q8TC71 538 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 TIFAQ96CG3 184 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 TWNKQ96RR1 684 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 TTPALQ9BTX7 342 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 C11orf84Q9BUA3 381 aaPredicted RBP14.88□□□□□ -0.03
ACTN4-203ENST00000424234 ZBP1Q9H171 429 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 NOCTQ9UK39 431 aaKnown RBP14.88□□□□□ -0.03
ACTN4-203ENST00000424234 BRWD1Q9NSI6 2320 aa14.88□□□□□ -0.03
ACTN4-203ENST00000424234 SART1O43290 800 aaKnown RBP14.87□□□□□ -0.03
ACTN4-203ENST00000424234 RB1P06400 928 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 ACTN2P35609 894 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 YWHAHQ04917 246 aaPredicted RBP14.87□□□□□ -0.03
ACTN4-203ENST00000424234 PTPROQ16827 1216 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 USP41Q3LFD5 358 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 LEKR1Q6ZMV7 388 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 PALB2Q86YC2 1186 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 FBXO22Q8NEZ5 403 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 FAM76AQ8TAV0 307 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 EPS8L1Q8TE68 723 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 RTP3Q9BQQ7 232 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 AP1M1Q9BXS5 423 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 ALG13Q9NP73 1137 aaKnown RBP14.87□□□□□ -0.03
ACTN4-203ENST00000424234 CHST7Q9NS84 486 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 BARX2Q9UMQ3 279 aaPredicted RBP14.87□□□□□ -0.03
ACTN4-203ENST00000424234 CNTN6Q9UQ52 1028 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 LZTS1Q9Y250 596 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 PCDHB4Q9Y5E5 795 aa14.87□□□□□ -0.03
ACTN4-203ENST00000424234 GOLGA6CA6NDK9 693 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 ZSCAN5CA6NGD5 496 aaPredicted RBP14.86□□□□□ -0.03
ACTN4-203ENST00000424234 FAM163BP0C2L3 166 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 GOLGA6DP0CG33 693 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 CHRNB2P17787 502 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 USP8P40818 1118 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 GLUD2P49448 558 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 ZNF132P52740 706 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 NDST1P52848 882 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 KRT17Q04695 432 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 ORC1Q13415 861 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 MRPL58Q14197 206 aaKnown RBP14.86□□□□□ -0.03
ACTN4-203ENST00000424234 CFAP58Q5T655 872 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 TMEM270Q6UE05 265 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 NOP9Q86U38 636 aaKnown RBP14.86□□□□□ -0.03
ACTN4-203ENST00000424234 METTL23Q86XA0 190 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 CEP57Q86XR8 500 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 VPS52Q8N1B4 723 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 RBBP8NLQ8NC74 664 aaPredicted RBP14.86□□□□□ -0.03
ACTN4-203ENST00000424234 OR6B3Q8NGW1 331 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 RIN2Q8WYP3 895 aaPredicted RBP14.86□□□□□ -0.03
ACTN4-203ENST00000424234 ELOVL4Q9GZR5 314 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 ANAPC1Q9H1A4 1944 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 SNX25Q9H3E2 840 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 CERS4Q9HA82 394 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 SLC28A3Q9HAS3 691 aa14.86□□□□□ -0.03
ACTN4-203ENST00000424234 DDX43Q9NXZ2 648 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms