RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 MAPK8IP1Q9UQF2 711 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 PCDHGA2Q9Y5H1 932 aa16.19■□□□□ 0.18
USB1-202ENST00000423271 HELZP42694 1942 aaKnown RBP16.19■□□□□ 0.18
USB1-202ENST00000423271 TRAV19A0A0A6YYK7 116 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 SOBPA7XYQ1 873 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 CLDN5O00501 218 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 CKMP06732 381 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 FAM163BP0C2L3 166 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 ANXA13P27216 316 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 AP3M2P53677 418 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 USP4Q13107 963 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 LRRC32Q14392 662 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 ZNF268Q14587 947 aaPredicted RBP16.18■□□□□ 0.18
USB1-202ENST00000423271 ZNF77Q15935 545 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 ZNF667Q5HYK9 610 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 C1orf228Q6PIY5 440 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 DENND5BQ6ZUT9 1274 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 ARL14EPQ8N8R7 260 aaPredicted RBP16.18■□□□□ 0.18
USB1-202ENST00000423271 IER2Q9BTL4 223 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 B3GNT5Q9BYG0 378 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 C2orf42Q9NWW7 574 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 TRAF3IP3Q9Y228 551 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 DCHS1Q96JQ0 3298 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 DMXL1Q9Y485 3027 aa16.18■□□□□ 0.18
USB1-202ENST00000423271 TRIM66O15016 1216 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 CALUO43852 315 aaPredicted RBP16.17■□□□□ 0.18
USB1-202ENST00000423271 LILRB5O75023 590 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 USP17L7P0C7H9 530 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 UBE2HP62256 183 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 RUNX3Q13761 415 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 CCINQ13939 588 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 MTF1Q14872 753 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 ZACNQ401N2 412 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 MAMSTRQ6ZN01 415 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 TMC2Q8TDI7 906 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 ATRIPQ8WXE1 791 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 CCDC47Q96A33 483 aaKnown RBP16.17■□□□□ 0.18
USB1-202ENST00000423271 C8orf48Q96LL4 319 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 TTLL2Q9BWV7 592 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 ELOVL4Q9GZR5 314 aa16.17■□□□□ 0.18
USB1-202ENST00000423271 AKAP3O75969 853 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 NR2F2P24468 414 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 HOXC13P31276 330 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 CCR3P51677 355 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 IFRD2Q12894 506 aaPredicted RBP16.16■□□□□ 0.18
USB1-202ENST00000423271 ORC1Q13415 861 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 KCNB1Q14721 858 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 DGKKQ5KSL6 1271 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 NAIF1Q69YI7 327 aaPredicted RBP16.16■□□□□ 0.18
USB1-202ENST00000423271 SPOPLQ6IQ16 392 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 CC2D1AQ6P1N0 951 aaPredicted RBP16.16■□□□□ 0.18
USB1-202ENST00000423271 SV2AQ7L0J3 742 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 SMYD4Q8IYR2 804 aaPredicted RBP16.16■□□□□ 0.18
USB1-202ENST00000423271 SPEM1Q8N4L4 309 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 DCLK2Q8N568 766 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 SH3RF2Q8TEC5 729 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 CEP295NLQ96MC4 621 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.16■□□□□ 0.185e-9■■■■■ 51.3
USB1-202ENST00000423271 TRPM5Q9NZQ8 1165 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 HMGXB4Q9UGU5 601 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 FRMD4BQ9Y2L6 1034 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 WNT6Q9Y6F9 365 aa16.16■□□□□ 0.18
USB1-202ENST00000423271 ATG2BQ96BY7 2078 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 CEP250Q9BV73 2442 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 KIF20AO95235 890 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 HLA-DRAP01903 254 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 TRIM49P0CI25 452 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 TRIM49CP0CI26 452 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 PIK3CAP42336 1068 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 CXCL12P48061 93 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 VAMP7P51809 220 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 NOP14P78316 857 aaKnown RBP16.15■□□□□ 0.18
USB1-202ENST00000423271 ZXDBP98169 803 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 DMWDQ09019 674 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 PNOCQ13519 176 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 PDGFRLQ15198 375 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 NFIL3Q16649 462 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 FSTL4Q6MZW2 842 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 PKN3Q6P5Z2 889 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 PAQR9Q6ZVX9 377 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 FAM35AQ86V20 835 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 GUF1Q8N442 669 aaKnown RBP16.15■□□□□ 0.18
USB1-202ENST00000423271 TIGD1Q96MW7 591 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 GBP4Q96PP9 640 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 HINFPQ9BQA5 517 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 DUS2Q9NX74 493 aaKnown RBP16.15■□□□□ 0.18
USB1-202ENST00000423271 ARHGAP26Q9UNA1 814 aa16.15■□□□□ 0.18
USB1-202ENST00000423271 ZNF840PA6NDX5 716 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 ASS1P00966 412 aaKnown RBP16.14■□□□□ 0.17
USB1-202ENST00000423271 HDCP19113 662 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 ASPAP45381 313 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 GCLMP48507 274 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 IFNAR2P48551 515 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 PPP3CAQ08209 521 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 TAF10Q12962 218 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 SGSM1Q2NKQ1 1148 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 ZCWPW2Q504Y3 356 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 TMEM196Q5HYL7 178 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 ACOT1Q86TX2 421 aa16.14■□□□□ 0.17
USB1-202ENST00000423271 FAM186BQ8IYM0 893 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms