RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 MAP3K7CLP57077 242 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 SGO2Q562F6 1265 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 ARHGAP17Q68EM7 881 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 PTCRAQ6ISU1 281 aaPredicted RBP9.83□□□□□ -0.84
PDGFC-202ENST00000422544 CYP26C1Q6V0L0 522 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 HS6ST3Q8IZP7 471 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 ELMOD1Q8N336 334 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 SUSD6Q92537 303 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 SMARCD1Q96GM5 515 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 C8orf48Q96LL4 319 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 RIPOR3Q96MK2 946 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 PHOX2BQ99453 314 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 SMOQ99835 787 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 ZSWIM1Q9BR11 485 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 CORO1BQ9BR76 489 aa9.83□□□□□ -0.84
PDGFC-202ENST00000422544 TSC2P49815 1807 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 SLC38A8A6NNN8 435 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 F8VZ95 297 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 O00370 1275 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 TRIM66O15016 1216 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 AP5Z1O43299 807 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 CBFA2T2O43439 604 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 RHOP08100 348 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 POU2F2P09086 479 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 FAM200BP0CF97 657 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 IL9P15248 144 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 ANXA13P27216 316 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 CLCN1P35523 988 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 PBX1P40424 430 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 MTHFRP42898 656 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 MRE11P49959 708 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 MTMR3Q13615 1198 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 CBX2Q14781 532 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-202ENST00000422544 VEPH1Q14D04 833 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 CNGA2Q16280 664 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 TAF12Q16514 161 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 AAK1Q2M2I8 961 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 GOLGA7BQ2TAP0 167 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 PUS10Q3MIT2 529 aaKnown RBP9.82□□□□□ -0.84
PDGFC-202ENST00000422544 ITIH5Q86UX2 942 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 GPIHBP1Q8IV16 184 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 FAM71AQ8IYT1 594 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 ANKRD52Q8NB46 1076 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 ZMIZ2Q8NF64 920 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 UBA3Q8TBC4 463 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 PSMG2Q969U7 264 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 SPATA17Q96L03 361 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 SPAG5Q96R06 1193 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 DUSP16Q9BY84 665 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 POMKQ9H5K3 350 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 ZNF334Q9HCZ1 680 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-202ENST00000422544 WDR6Q9NNW5 1121 aaKnown RBP9.82□□□□□ -0.84
PDGFC-202ENST00000422544 DMAP1Q9NPF5 467 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-202ENST00000422544 TSPAN16Q9UKR8 245 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 MAGED2Q9UNF1 606 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-202ENST00000422544 ASB3Q9Y575 518 aa9.82□□□□□ -0.84
PDGFC-202ENST00000422544 NRG2O14511 850 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-202ENST00000422544 THAP12O43422 761 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 GFPT2O94808 682 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 MICAL2O94851 1124 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 TPM3P06753 285 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 CFHP08603 1231 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 CSH1P0DML2 217 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 CSH2P0DML3 217 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 MYL4P12829 197 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 HMGA1P17096 107 aaKnown RBP9.81□□□□□ -0.84
PDGFC-202ENST00000422544 NPR3P17342 541 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 GNA15P30679 374 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 SOX5P35711 763 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 CCR2P41597 374 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 STAT1P42224 750 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 JAM2P57087 298 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 USP46P62068 366 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 PTK2Q05397 1052 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 SMAD2Q15796 467 aaKnown RBP9.81□□□□□ -0.84
PDGFC-202ENST00000422544 SLC5A9Q2M3M2 681 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 PABPC1LQ4VXU2 614 aaKnown RBP9.81□□□□□ -0.84
PDGFC-202ENST00000422544 CYP4A22Q5TCH4 519 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 LCLAT1Q6UWP7 414 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 CLEC20AQ6ZU45 233 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 PDZD4Q76G19 769 aaPredicted RBP9.81□□□□□ -0.84
PDGFC-202ENST00000422544 CACNA2D4Q7Z3S7 1137 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 SLC47A2Q86VL8 602 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 TTC30AQ86WT1 665 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 TMC8Q8IU68 726 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 ITFG1Q8TB96 612 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 ZNF606Q8WXB4 792 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 TCEAL4Q96EI5 215 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 NECTIN4Q96NY8 510 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 LRRC3Q9BY71 257 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 TRIM5Q9C035 493 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 CSNK1G1Q9HCP0 422 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 ASAH2Q9NR71 780 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 HESX1Q9UBX0 185 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.81□□□□□ -0.84
PDGFC-202ENST00000422544 HCN4Q9Y3Q4 1203 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 DAAM1Q9Y4D1 1078 aa9.81□□□□□ -0.84
PDGFC-202ENST00000422544 HHLA1C9JL84 531 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 TULP2O00295 520 aa9.8□□□□□ -0.84
PDGFC-202ENST00000422544 TNFRSF10BO14763 440 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms