RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 PRAMEF12O95522 483 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 ASPAP45381 313 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 MXI1P50539 228 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 NOP14P78316 857 aaKnown RBP23.3■■□□□ 1.32
TRAF4-204ENST00000422344 DCAF17Q5H9S7 520 aaPredicted RBP23.3■■□□□ 1.32
TRAF4-204ENST00000422344 TCERG1LQ5VWI1 586 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 TXNDC8Q6A555 127 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 DENND5BQ6ZUT9 1274 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 MON1AQ86VX9 555 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 BPIFB1Q8TDL5 484 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 C8orf48Q96LL4 319 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 DDX23Q9BUQ8 820 aaKnown RBP23.3■■□□□ 1.32
TRAF4-204ENST00000422344 B3GNT5Q9BYG0 378 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 ZNF518BQ9C0D4 1074 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 DNAI2Q9GZS0 605 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 SMG9Q9H0W8 520 aaKnown RBP23.3■■□□□ 1.32
TRAF4-204ENST00000422344 TRPC7Q9HCX4 862 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 THG1LQ9NWX6 298 aaKnown RBP23.3■■□□□ 1.32
TRAF4-204ENST00000422344 TRIM49BA6NDI0 452 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 FAM170BA6NMN3 283 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 MAN2B1O00754 1011 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 LAMTOR5O43504 91 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 CD72P21854 359 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 CCNE1P24864 410 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 PMS1P54277 932 aaKnown RBP23.29■■□□□ 1.32
TRAF4-204ENST00000422344 FCHO2Q0JRZ9 810 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 ARHGAP29Q52LW3 1261 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 ACOT1Q86TX2 421 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 UNC93AQ86WB7 457 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 NELL2Q99435 816 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 NIF3L1Q9GZT8 377 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 LTB4R2Q9NPC1 389 aa23.29■■□□□ 1.32
TRAF4-204ENST00000422344 MED19A0JLT2 244 aaPredicted RBP23.28■■□□□ 1.32
TRAF4-204ENST00000422344 BIN1O00499 593 aa23.28■■□□□ 1.32
TRAF4-204ENST00000422344 CLDN5O00501 218 aa23.28■■□□□ 1.32
TRAF4-204ENST00000422344 NDST1P52848 882 aa23.28■■□□□ 1.32
TRAF4-204ENST00000422344 KLHL10Q6JEL2 608 aa23.28■■□□□ 1.32
TRAF4-204ENST00000422344 SUMF1Q8NBK3 374 aa23.28■■□□□ 1.32
TRAF4-204ENST00000422344 OSBPL6Q9BZF3 934 aa23.28■■□□□ 1.32
TRAF4-204ENST00000422344 KIF9Q9HAQ2 790 aa23.28■■□□□ 1.32
TRAF4-204ENST00000422344 CYP3A43Q9HB55 503 aa23.28■■□□□ 1.32
TRAF4-204ENST00000422344 ARMCX3Q9UH62 379 aaPredicted RBP23.28■■□□□ 1.32
TRAF4-204ENST00000422344 PIAS3Q9Y6X2 628 aa23.28■■□□□ 1.32
TRAF4-204ENST00000422344 TRAV19A0A0A6YYK7 116 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 NCAM2O15394 837 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 TADA3O75528 432 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 CKMP06732 381 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 KPNA1P52294 538 aaPredicted RBP23.27■■□□□ 1.32
TRAF4-204ENST00000422344 PLCB2Q00722 1185 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 ORC1Q13415 861 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 PUM1Q14671 1186 aaKnown RBP eCLIP23.27■■□□□ 1.32
TRAF4-204ENST00000422344 FAM35AQ86V20 835 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 ZC3H3Q8IXZ2 948 aaKnown RBP23.27■■□□□ 1.32
TRAF4-204ENST00000422344 FBXL13Q8NEE6 735 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 SMARCD1Q96GM5 515 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 APOBEC3GQ9HC16 384 aaKnown RBP23.27■■□□□ 1.32
TRAF4-204ENST00000422344 TDP1Q9NUW8 608 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 TRPM5Q9NZQ8 1165 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 NCOR2Q9Y618 2525 aa23.27■■□□□ 1.32
TRAF4-204ENST00000422344 PATJQ8NI35 1801 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 PTPRDP23468 1912 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 BICDL2A1A5D9 508 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 USP17L7P0C7H9 530 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 PDE6CP51160 858 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 MCCD1P59942 119 aaPredicted RBP23.26■■□□□ 1.31
TRAF4-204ENST00000422344 CSTF1Q05048 431 aaKnown RBP23.26■■□□□ 1.31
TRAF4-204ENST00000422344 MORC3Q14149 939 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 ZNF528Q3MIS6 628 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 WDR44Q5JSH3 913 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 CC2D1AQ6P1N0 951 aaPredicted RBP23.26■■□□□ 1.31
TRAF4-204ENST00000422344 USP13Q92995 863 aaPredicted RBP23.26■■□□□ 1.31
TRAF4-204ENST00000422344 ZFYVE19Q96K21 471 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 LRRC3BQ96PB8 259 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 DMAP1Q9NPF5 467 aaPredicted RBP23.26■■□□□ 1.31
TRAF4-204ENST00000422344 HMGXB4Q9UGU5 601 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 FBXO4Q9UKT5 387 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 OBSL1O75147 1896 aa23.26■■□□□ 1.31
TRAF4-204ENST00000422344 TICRRQ7Z2Z1 1910 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 ARNTLO00327 626 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 CD44P16070 742 aaKnown RBP23.25■■□□□ 1.31
TRAF4-204ENST00000422344 CD58P19256 250 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 PPP3CCP48454 512 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 CACNA2D1P54289 1103 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 USP46P62068 366 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 IFRD2Q12894 506 aaPredicted RBP23.25■■□□□ 1.31
TRAF4-204ENST00000422344 CCDC40Q4G0X9 1142 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 CRYBG2Q8N1P7 616 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 TTC16Q8NEE8 873 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 NELFBQ8WX92 580 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 FAM3CQ92520 227 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 MSANTD3Q96H12 275 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 CEP63Q96MT8 703 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 SLITRK1Q96PX8 696 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 TTLL2Q9BWV7 592 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 NT5C1AQ9BXI3 368 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 METTL14Q9HCE5 456 aaKnown RBP23.25■■□□□ 1.31
TRAF4-204ENST00000422344 KRT82Q9NSB4 513 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 RAB20Q9NX57 234 aa23.25■■□□□ 1.31
TRAF4-204ENST00000422344 NDRG2Q9UN36 371 aaKnown RBP23.25■■□□□ 1.31
TRAF4-204ENST00000422344 CTNND2Q9UQB3 1225 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms