RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CDCA3Q99618 268 aaPredicted RBP16.61■□□□□ 0.25
DDX55-203ENST00000421670 CSNK1G1Q9HCP0 422 aa16.61■□□□□ 0.25
DDX55-203ENST00000421670 BZW2Q9Y6E2 419 aaKnown RBP16.61■□□□□ 0.25
DDX55-203ENST00000421670 DENND4CQ5VZ89 1909 aa16.61■□□□□ 0.25
DDX55-203ENST00000421670 TRIM66O15016 1216 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 RFPL2O75678 378 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 SETSIPP0DME0 302 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 GPD2P43304 727 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 RGS7P49802 495 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 SLC8A3P57103 927 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 NOMO3P69849 1222 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 TWF1Q12792 350 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 KCNC3Q14003 757 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 NAA35Q5VZE5 725 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 GPRIN1Q7Z2K8 1008 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX55-203ENST00000421670 HSFX1Q9UBD0 423 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 CEP83Q9Y592 693 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 UNC80Q8N2C7 3258 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 PIK3R2O00459 728 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 DDX3XO00571 662 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX55-203ENST00000421670 XPO1O14980 1071 aaKnown RBP16.6■□□□□ 0.25
DDX55-203ENST00000421670 TNFAIP3P21580 790 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 ANXA13P27216 316 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 TUFMP49411 452 aaKnown RBP16.6■□□□□ 0.25
DDX55-203ENST00000421670 CCDC173Q0VFZ6 552 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 PMF1Q6P1K2 205 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 CCDC149Q6ZUS6 474 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 PIGZQ86VD9 579 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 TMEM139Q8IV31 216 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 WDTC1Q8N5D0 677 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 EFHBQ8N7U6 833 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 GIPC2Q8TF65 315 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 SLC35F5Q8WV83 523 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 CPA5Q8WXQ8 436 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 LHX5Q9H2C1 402 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 DEF6Q9H4E7 631 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 PLEKHA4Q9H4M7 779 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 NHEJ1Q9H9Q4 299 aaPredicted RBP16.6■□□□□ 0.25
DDX55-203ENST00000421670 ADAMTS1Q9UHI8 967 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 MAFFQ9ULX9 164 aa16.6■□□□□ 0.25
DDX55-203ENST00000421670 ANAPC1Q9H1A4 1944 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 A0A087X0T9 212 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 SOWAHDA6NJG2 315 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 TMCO5BA8MYB1 307 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 HHLA1C9JL84 531 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 LSM8O95777 96 aaKnown RBP16.59■□□□□ 0.25
DDX55-203ENST00000421670 C1RP00736 705 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 CYP1A1P04798 512 aaPredicted RBP16.59■□□□□ 0.25
DDX55-203ENST00000421670 PTMAP06454 111 aaKnown RBP16.59■□□□□ 0.25
DDX55-203ENST00000421670 FAM228BP0C875 321 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 FECHP22830 423 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 PLA2G4AP47712 749 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 ALDH1A3P47895 512 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 RPL10AP62906 217 aaKnown RBP16.59■□□□□ 0.25
DDX55-203ENST00000421670 CDK17Q00537 523 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 IFRD2Q12894 506 aaPredicted RBP16.59■□□□□ 0.25
DDX55-203ENST00000421670 PDCLQ13371 301 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 CLEC16AQ2KHT3 1053 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 CYP26C1Q6V0L0 522 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 VPS36Q86VN1 386 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 DNAAF5Q86Y56 855 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 TMEM35BQ8NCS4 154 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 SLC30A5Q8TAD4 765 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 FEZF2Q8TBJ5 459 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 C8orf48Q96LL4 319 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 BAG1Q99933 345 aaPredicted RBP16.59■□□□□ 0.25
DDX55-203ENST00000421670 ST7Q9NRC1 585 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 MTMR10Q9NXD2 777 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 TAS2R14Q9NYV8 317 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 TJP2Q9UDY2 1190 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 NOTCH4Q99466 2003 aa16.59■□□□□ 0.25
DDX55-203ENST00000421670 SSU72P8A0A1W2PR75 194 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 CCL16O15467 120 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 ZMYND10O75800 440 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 LRG1P02750 347 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 UNGP13051 313 aaPredicted RBP16.58■□□□□ 0.24
DDX55-203ENST00000421670 FOSL2P15408 326 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 CDH5P33151 784 aaPredicted RBP16.58■□□□□ 0.24
DDX55-203ENST00000421670 SLC5A3P53794 718 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 GFPT1Q06210 699 aaPredicted RBP16.58■□□□□ 0.24
DDX55-203ENST00000421670 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
DDX55-203ENST00000421670 MTMR3Q13615 1198 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 C2CD6Q53TS8 623 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 PPM1LQ5SGD2 360 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 TRIM72Q6ZMU5 477 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 CCDC42Q96M95 316 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 CPXM1Q96SM3 734 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 SPTLC3Q9NUV7 552 aa16.58■□□□□ 0.24
DDX55-203ENST00000421670 TNFRSF10BO14763 440 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 KIF11P52732 1056 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 EPHB3P54753 998 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 USP46P62068 366 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 CENPCQ03188 943 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 ADIGQ0VDE8 80 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 MTF1Q14872 753 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 CCDC85BQ15834 202 aaPredicted RBP16.57■□□□□ 0.24
DDX55-203ENST00000421670 ASTE1Q2TB18 679 aaPredicted RBP16.57■□□□□ 0.24
DDX55-203ENST00000421670 PTPN20Q4JDL3 420 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms