RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 DARS2Q6PI48 645 aaKnown RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 FAM183BPQ6ZVS7 135 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 PNMA8AQ86V59 439 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 PACS2Q86VP3 889 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 SPATA18Q8TC71 538 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 SLCO2A1Q92959 643 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
DDX56-203ENST00000421223 ADAM7Q9H2U9 754 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 CACNG4Q9UBN1 327 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 OTOFQ9HC10 1997 aa11.49□□□□□ -0.57
DDX56-203ENST00000421223 PRPSAP2O60256 369 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 RBP3P10745 1247 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 KLRC2P26717 231 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 MMP13P45452 471 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 ERMARDQ5T6L9 678 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 FAXCQ5TGI0 409 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 PMF1Q6P1K2 205 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 UNC45BQ8IWX7 931 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 ALLCQ8N6M5 410 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 NETO2Q8NC67 525 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 BBOF1Q8ND07 529 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 RNF39Q9H2S5 420 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 DPEP3Q9H4B8 488 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 RRAGCQ9HB90 399 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 HESX1Q9UBX0 185 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 RASA4BC9J798 803 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 DNALI1O14645 258 aaPredicted RBP11.48□□□□□ -0.57
DDX56-203ENST00000421223 RASA4O43374 803 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 RECQL4O94761 1208 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 SMIM10L2AP0DMW4 78 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 SMIM10L2BP0DMW5 78 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 CTCFP49711 727 aaPredicted RBP11.48□□□□□ -0.57
DDX56-203ENST00000421223 CAV1Q03135 178 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 CNGA2Q16280 664 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 ZC3H12AQ5D1E8 599 aaKnown RBP11.48□□□□□ -0.57
DDX56-203ENST00000421223 KCNN1Q92952 543 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 MAGEB5Q9BZ81 275 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 FAM129AQ9BZQ8 928 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 LHX5Q9H2C1 402 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 ASNSD1Q9NWL6 643 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 SBF1O95248 1867 aa11.48□□□□□ -0.57
DDX56-203ENST00000421223 TCP11X1B4DZS4 312 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 TREHO43280 583 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 CCDC130P13994 396 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 GPD1P21695 349 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 SLC25A11Q02978 314 aaKnown RBP11.47□□□□□ -0.57
DDX56-203ENST00000421223 CCDC142Q17RM4 750 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 SPDYCQ5MJ68 293 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 ZNF618Q5T7W0 954 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 ANKRD22Q5VYY1 191 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 FBXW10Q5XX13 1052 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 HIBCHQ6NVY1 386 aaPredicted RBP11.47□□□□□ -0.57
DDX56-203ENST00000421223 TADA2BQ86TJ2 420 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 C4orf33Q8N1A6 199 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 NDRG1Q92597 394 aaKnown RBP11.47□□□□□ -0.57
DDX56-203ENST00000421223 KIF9Q9HAQ2 790 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 ATXN2Q99700 1313 aaKnown RBP11.47□□□□□ -0.57
DDX56-203ENST00000421223 SSTR1P30872 391 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 HOXA11P31270 313 aaPredicted RBP11.47□□□□□ -0.57
DDX56-203ENST00000421223 STX2P32856 288 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 CDH5P33151 784 aaPredicted RBP11.47□□□□□ -0.57
DDX56-203ENST00000421223 ATXN1P54253 815 aaKnown RBP11.47□□□□□ -0.57
DDX56-203ENST00000421223 ZNF268Q14587 947 aaPredicted RBP11.47□□□□□ -0.57
DDX56-203ENST00000421223 LRRC38Q5VT99 294 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 NUGGCQ68CJ6 796 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 EGFL6Q8IUX8 553 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 CLEC4CQ8WTT0 213 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 PEBP4Q96S96 227 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 PARK7Q99497 189 aaKnown RBP11.47□□□□□ -0.57
DDX56-203ENST00000421223 ITGA11Q9UKX5 1188 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 BRCA2P51587 3418 aa11.47□□□□□ -0.57
DDX56-203ENST00000421223 SRRM3A6NNA2 597 aaPredicted RBP11.46□□□□□ -0.57
DDX56-203ENST00000421223 MCF2LO15068 1137 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 LMO2P25791 158 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 ATICP31939 592 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 HUNKP57058 714 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 TMEM40Q8WWA1 233 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 FAM149B1Q96BN6 582 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 SERPINB12Q96P63 405 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 KLF6Q99612 283 aaPredicted RBP11.46□□□□□ -0.57
DDX56-203ENST00000421223 ROPN1BQ9BZX4 212 aaPredicted RBP11.46□□□□□ -0.57
DDX56-203ENST00000421223 KATNBL1Q9H079 304 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 ROPN1Q9HAT0 212 aaPredicted RBP11.46□□□□□ -0.57
DDX56-203ENST00000421223 CYP3A43Q9HB55 503 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 FGFR1OP2Q9NVK5 253 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 SAMD15Q9P1V8 674 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 WDR35Q9P2L0 1181 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 TCRBV7S3A2A0A539 114 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 GOLGA8RI6L899 631 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 TRUB2O95900 331 aaKnown RBP11.46□□□□□ -0.57
DDX56-203ENST00000421223 HMGCRP04035 888 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 DRD4P21917 467 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 RPL22P35268 128 aaKnown RBP11.46□□□□□ -0.57
DDX56-203ENST00000421223 RABGGTBP53611 331 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 MPP2Q14168 576 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 FAM187BQ17R55 369 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 TTC31Q49AM3 519 aaPredicted RBP11.46□□□□□ -0.57
DDX56-203ENST00000421223 TRNP1Q6NT89 227 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 SLC27A1Q6PCB7 646 aa11.46□□□□□ -0.57
DDX56-203ENST00000421223 FAM47EQ6ZV65 393 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms