RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 MYL2P10916 166 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 KDELR1P24390 212 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 VHLP40337 213 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 NAMPTP43490 491 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 CPA2P48052 419 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 NEK3P51956 506 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 SP2Q02086 613 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 PRKD1Q15139 912 aaPredicted RBP16.61■□□□□ 0.25
TRIM13-204ENST00000420995 CMPK2Q5EBM0 449 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 RFX8Q6ZV50 586 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 POLNQ7Z5Q5 900 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 CYTH2Q99418 400 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 CYTH4Q9UIA0 394 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 WDR81Q562E7 1941 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 TBX10O75333 385 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 AVILO75366 819 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 FAM155BO75949 473 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 KRT3P12035 628 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 MAP3K10Q02779 954 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 SNRNP48Q6IEG0 339 aaKnown RBP16.61■□□□□ 0.25
TRIM13-204ENST00000420995 ALYREFQ86V81 257 aaKnown RBP16.61■□□□□ 0.25
TRIM13-204ENST00000420995 SPDYE1Q8NFV5 336 aaPredicted RBP16.61■□□□□ 0.25
TRIM13-204ENST00000420995 FAM136AQ96C01 138 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 APOPT1Q96IL0 206 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 NMUR2Q9GZQ4 415 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 NIF3L1Q9GZT8 377 aa16.61■□□□□ 0.25
TRIM13-204ENST00000420995 TNS1Q9HBL0 1735 aaKnown RBP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 MAFGO15525 162 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 SUPT20HL2P0C7V6 817 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 ERFP50548 548 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 EIF3EP60228 445 aaKnown RBP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 MXRA7P84157 204 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 TAP1Q03518 808 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 ORC1Q13415 861 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 SUPT20HL1Q3ZLR7 823 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 THEMIS2Q5TEJ8 643 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 XRRA1Q6P2D8 792 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 CDHR3Q6ZTQ4 885 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 RFX6Q8HWS3 928 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 SCG3Q8WXD2 468 aaKnown RBP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 HSPH1Q92598 858 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 MTO1Q9Y2Z2 717 aaKnown RBP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 IKBKGQ9Y6K9 419 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 DNAJC6O75061 913 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 RBP3P10745 1247 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 ESRRAP11474 423 aaPredicted RBP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 HMGB2P26583 209 aaKnown RBP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 NPNTQ6UXI9 565 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 NSUN6Q8TEA1 469 aaKnown RBP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 SLC7A3Q8WY07 619 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 MECRQ9BV79 373 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 CALN1Q9BXU9 219 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 PHACTR1Q9C0D0 580 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 DHX33Q9H6R0 707 aaKnown RBP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 SPATS2LQ9NUQ6 558 aaKnown RBP16.6■□□□□ 0.25
TRIM13-204ENST00000420995 DLGAP2Q9P1A6 1054 aa16.6■□□□□ 0.25
TRIM13-204ENST00000420995 IQANK1A0A1B0GTG1 560 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 FCHO1O14526 889 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 INHBAP08476 426 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 CD19P15391 556 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 EIF4BP23588 611 aaKnown RBP16.59■□□□□ 0.25
TRIM13-204ENST00000420995 ABCD1P33897 745 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 ARL2P36404 184 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 SERPINB4P48594 390 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 ZNF200P98182 395 aaPredicted RBP16.59■□□□□ 0.25
TRIM13-204ENST00000420995 SATB1Q01826 763 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 RCN2Q14257 317 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 CCDC62Q6P9F0 684 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 SH2D5Q6ZV89 423 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 PRPF39Q86UA1 669 aaKnown RBP16.59■□□□□ 0.25
TRIM13-204ENST00000420995 ZC3H18Q86VM9 953 aaKnown RBP16.59■□□□□ 0.25
TRIM13-204ENST00000420995 CHSY1Q86X52 802 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 BRSK2Q8IWQ3 736 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 TTC13Q8NBP0 860 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 FBXO27Q8NI29 283 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 SLC44A1Q8WWI5 657 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 ZBTB10Q96DT7 871 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 OXNAD1Q96HP4 312 aaPredicted RBP16.59■□□□□ 0.25
TRIM13-204ENST00000420995 TCHPQ9BT92 498 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 ARHGEF4Q9NR80 690 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 KIAA1217Q5T5P2 1943 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 PSMG1O95456 288 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 OATP04181 439 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 KRT7P08729 469 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 RFC5P40937 340 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 CAPSQ13938 189 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 DPYSL3Q14195 570 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 GNPTABQ3T906 1256 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 MDH1BQ5I0G3 518 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 LRRC74BQ6ZQY2 392 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 KCTD6Q8NC69 237 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 SPATA18Q8TC71 538 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 ZNF518BQ9C0D4 1074 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 WASF2Q9Y6W5 498 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 PSME4Q14997 1843 aa16.59■□□□□ 0.25
TRIM13-204ENST00000420995 SP100P23497 879 aaPredicted RBP16.58■□□□□ 0.25
TRIM13-204ENST00000420995 CDH5P33151 784 aaPredicted RBP16.58■□□□□ 0.25
TRIM13-204ENST00000420995 RAP1GAPP47736 663 aa16.58■□□□□ 0.25
TRIM13-204ENST00000420995 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms