RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 SNRNP35Q16560 246 aaKnown RBP13.72□□□□□ -0.21
PRAME-207ENST00000420709 SHC4Q6S5L8 630 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 VSTM1Q6UX27 236 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 EPM2AIP1Q7L775 607 aaPredicted RBP13.72□□□□□ -0.21
PRAME-207ENST00000420709 HS2ST1Q7LGA3 356 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 OR6B3Q8NGW1 331 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 ZNF507Q8TCN5 953 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 CCDC127Q96BQ5 260 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 SPATA17Q96L03 361 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 FNBP1Q96RU3 617 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 CGRRF1Q99675 332 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 BLZF1Q9H2G9 400 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 SNX25Q9H3E2 840 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 DPEP3Q9H4B8 488 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 F8VP50 259 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 LEFTY2O00292 366 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 CLDN5O00501 218 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 DCLK1O15075 740 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 PPP6R2O75170 966 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 ABL1P00519 1130 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 ADRB1P08588 477 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 GNL1P36915 607 aaPredicted RBP13.71□□□□□ -0.21
PRAME-207ENST00000420709 RAP1GAPP47736 663 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 AMPD3Q01432 767 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 CYP24A1Q07973 514 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 DMC1Q14565 340 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 PSMD6Q15008 389 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 MAPRE1Q15691 268 aaKnown RBP13.71□□□□□ -0.21
PRAME-207ENST00000420709 FBXO43Q4G163 708 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 DENND5BQ6ZUT9 1274 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 C12orf50Q8NA57 414 aaPredicted RBP13.71□□□□□ -0.21
PRAME-207ENST00000420709 MYCBPAPQ8TBZ2 947 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 SCFD1Q8WVM8 642 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 ELMO3Q96BJ8 720 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 ZNF396Q96N95 335 aaPredicted RBP13.71□□□□□ -0.21
PRAME-207ENST00000420709 CUEDC2Q9H467 287 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 KIAA1586Q9HCI6 787 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 TMEM30AQ9NV96 361 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 SMPD4Q9NXE4 827 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 ARHGAP26Q9UNA1 814 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 INVSQ9Y283 1065 aa13.71□□□□□ -0.21
PRAME-207ENST00000420709 LAMA1P25391 3075 aa13.71□□□□□ -0.22
PRAME-207ENST00000420709 CCDC163A0A0D9SF12 145 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 TRIM66O15016 1216 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 POLR2DO15514 142 aaKnown RBP13.7□□□□□ -0.22
PRAME-207ENST00000420709 FOXD2O60548 495 aaPredicted RBP13.7□□□□□ -0.22
PRAME-207ENST00000420709 CUTAO60888 179 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 OPRD1P41143 372 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 CASP4P49662 377 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 MYL6P60660 151 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 TNNC1P63316 161 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 NR1H3Q13133 447 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 WDR72Q3MJ13 1102 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 PLK5Q496M5 336 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 SYT13Q7L8C5 426 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 CAMKK1Q8N5S9 505 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 IQUBQ8NA54 791 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 ZNF516Q92618 1163 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 EXOC4Q96A65 974 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 C7orf25Q9BPX7 421 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 ZNF518BQ9C0D4 1074 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 RNF38Q9H0F5 515 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 GZF1Q9H116 711 aaPredicted RBP13.7□□□□□ -0.22
PRAME-207ENST00000420709 SLC39A2Q9NP94 309 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 NXF1Q9UBU9 619 aaKnown RBP13.7□□□□□ -0.22
PRAME-207ENST00000420709 CPQQ9Y646 472 aa13.7□□□□□ -0.22
PRAME-207ENST00000420709 ZNF840PA6NDX5 716 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 TACC1O75410 805 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 CLSTN1O94985 981 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 YEATS4O95619 227 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 NFATC1O95644 943 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 APBB3O95704 486 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 ZNF806P0C7X5 589 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 TCF3P15923 654 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 PTPN1P18031 435 aaKnown RBP13.69□□□□□ -0.22
PRAME-207ENST00000420709 MPLP40238 635 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 AFMP43652 599 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 DGKEP52429 567 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 TAF10Q12962 218 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 TRPC3Q13507 836 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 CUL4BQ13620 913 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 GAB4Q2WGN9 574 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 IL31Q6EBC2 164 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 TCEAL6Q6IPX3 200 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 SCARA5Q6ZMJ2 495 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 UNC13DQ70J99 1090 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 FILIP1Q7Z7B0 1213 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 SFTPA1Q8IWL2 248 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 GRAMD1CQ8IYS0 662 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 XXYLT1Q8NBI6 393 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 TCEAL3Q969E4 200 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 ACDQ96AP0 544 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 LOXL4Q96JB6 756 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 TTLL2Q9BWV7 592 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 B3GNT5Q9BYG0 378 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 TPSD1Q9BZJ3 242 aa13.69□□□□□ -0.22
PRAME-207ENST00000420709 DUSP15Q9H1R2 295 aaPredicted RBP13.69□□□□□ -0.22
PRAME-207ENST00000420709 SMYD3Q9H7B4 428 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms