RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 B3GNT5Q9BYG0 378 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 ZNF518BQ9C0D4 1074 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 SCAND2PQ9GZW5 306 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-206ENST00000420121 KIF9Q9HAQ2 790 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 ZSCAN32Q9NX65 697 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 NXF1Q9UBU9 619 aaKnown RBP11.78□□□□□ -0.52
SSBP3-206ENST00000420121 R3HCC1Q9Y3T6 440 aaKnown RBP11.78□□□□□ -0.52
SSBP3-206ENST00000420121 PCDHGA2Q9Y5H1 932 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 DNAH14Q0VDD8 3507 aa11.78□□□□□ -0.52
SSBP3-206ENST00000420121 F8VP50 259 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 CLDN5O00501 218 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 ZNF202O95125 648 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 ARSAP15289 507 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 TCF3P15923 654 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 GRIK1P39086 918 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 RAP1GAPP47736 663 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 AP3M2P53677 418 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 MCCD1P59942 119 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-206ENST00000420121 TNNC1P63316 161 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 NOP14P78316 857 aaKnown RBP11.77□□□□□ -0.53
SSBP3-206ENST00000420121 SATB1Q01826 763 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 CYP27A1Q02318 531 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 TRPC3Q13507 836 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 RUNX3Q13761 415 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 NCOA4Q13772 614 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 NFIL3Q16649 462 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 ZNF699Q32M78 642 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 ITPRIPL2Q3MIP1 535 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 ZCWPW2Q504Y3 356 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 PKN3Q6P5Z2 889 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 C1orf228Q6PIY5 440 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 DENND5BQ6ZUT9 1274 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 SPEM1Q8N4L4 309 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 DCLK2Q8N568 766 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 ARL14EPQ8N8R7 260 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-206ENST00000420121 B3GALNT2Q8NCR0 500 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 TMC2Q8TDI7 906 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 SYAP1Q96A49 352 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-206ENST00000420121 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
SSBP3-206ENST00000420121 C8orf48Q96LL4 319 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 SNX25Q9H3E2 840 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 EBF3Q9H4W6 596 aa11.77□□□□□ -0.53
SSBP3-206ENST00000420121 SPAG17Q6Q759 2223 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 A8MXQ7 604 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 K7ESF4 209 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 KINO60870 393 aaKnown RBP11.76□□□□□ -0.53
SSBP3-206ENST00000420121 AKAP3O75969 853 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 PAPSS2O95340 614 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-206ENST00000420121 OLFM2O95897 454 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 USP17L7P0C7H9 530 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 DMWDQ09019 674 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 BIRC3Q13489 604 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 LRRC32Q14392 662 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 KCNB1Q14721 858 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 MTF1Q14872 753 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 ZNF667Q5HYK9 610 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 TMEM196Q5HYL7 178 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 DGKKQ5KSL6 1271 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 NAIF1Q69YI7 327 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-206ENST00000420121 FSTL4Q6MZW2 842 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 SCARA5Q6ZMJ2 495 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 SV2AQ7L0J3 742 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 GUF1Q8N442 669 aaKnown RBP11.76□□□□□ -0.53
SSBP3-206ENST00000420121 EZH1Q92800 747 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-206ENST00000420121 FAM126AQ9BYI3 521 aaPredicted RBP11.76□□□□□ -0.53
SSBP3-206ENST00000420121 ELOVL4Q9GZR5 314 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 EPC1Q9H2F5 836 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 FBRSL1Q9HCM7 1045 aaKnown RBP11.76□□□□□ -0.53
SSBP3-206ENST00000420121 TRPC7Q9HCX4 862 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 THG1LQ9NWX6 298 aaKnown RBP11.76□□□□□ -0.53
SSBP3-206ENST00000420121 HMGXB4Q9UGU5 601 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 MAPK8IP1Q9UQF2 711 aa11.76□□□□□ -0.53
SSBP3-206ENST00000420121 TRAV19A0A0A6YYK7 116 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 ZNF840PA6NDX5 716 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 TRDMT1O14717 391 aaKnown RBP11.75□□□□□ -0.53
SSBP3-206ENST00000420121 TNFRSF10BO14763 440 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 IKBKBO14920 756 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 TRIM66O15016 1216 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 MAPK13O15264 365 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 PHACTR2O75167 634 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 ASS1P00966 412 aaKnown RBP11.75□□□□□ -0.53
SSBP3-206ENST00000420121 OAS1P00973 400 aaKnown RBP11.75□□□□□ -0.53
SSBP3-206ENST00000420121 CKMP06732 381 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 NR2F2P24468 414 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 ASPAP45381 313 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 CCR3P51677 355 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 PPP3CAQ08209 521 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 EML3Q32P44 896 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 CEP135Q66GS9 1140 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 SPOPLQ6IQ16 392 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 FAM35AQ86V20 835 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 FUKQ8N0W3 1084 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 FMR1NBQ8N0W7 255 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-206ENST00000420121 ZMIZ2Q8NF64 920 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 ENGASEQ8NFI3 743 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 SH3RF2Q8TEC5 729 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 OSCP1Q8WVF1 389 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 ATRIPQ8WXE1 791 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 RUBCNQ92622 972 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms