RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 RCOR1Q9UKL0 485 aa21.74■■□□□ 1.07
MCF2L-212ENST00000420013 USP18Q9UMW8 372 aa21.74■■□□□ 1.07
MCF2L-212ENST00000420013 ACTN4O43707 911 aaKnown RBP21.73■■□□□ 1.07
MCF2L-212ENST00000420013 CST3P01034 146 aaPredicted RBP21.73■■□□□ 1.07
MCF2L-212ENST00000420013 PDGFRBP09619 1106 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 ARSAP15289 507 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 GNL1P36915 607 aaPredicted RBP21.73■■□□□ 1.07
MCF2L-212ENST00000420013 DNM1Q05193 864 aaKnown RBP21.73■■□□□ 1.07
MCF2L-212ENST00000420013 PSMD2Q13200 908 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 SIM2Q14190 667 aaPredicted RBP21.73■■□□□ 1.07
MCF2L-212ENST00000420013 FSTL4Q6MZW2 842 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 SLC9A9Q8IVB4 645 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 OR6B3Q8NGW1 331 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 MRPL45Q9BRJ2 306 aaKnown RBP21.73■■□□□ 1.07
MCF2L-212ENST00000420013 XYLT2Q9H1B5 865 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 ECT2Q9H8V3 914 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 DUS2Q9NX74 493 aaKnown RBP21.73■■□□□ 1.07
MCF2L-212ENST00000420013 EML5Q05BV3 1969 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 ATP8B3O60423 1300 aa21.73■■□□□ 1.07
MCF2L-212ENST00000420013 OTOL1A6NHN0 477 aaPredicted RBP21.72■■□□□ 1.07
MCF2L-212ENST00000420013 KLRC4O43908 158 aa21.72■■□□□ 1.07
MCF2L-212ENST00000420013 FOXD2O60548 495 aaPredicted RBP21.72■■□□□ 1.07
MCF2L-212ENST00000420013 NFATC1O95644 943 aa21.72■■□□□ 1.07
MCF2L-212ENST00000420013 GJA4P35212 333 aa21.72■■□□□ 1.07
MCF2L-212ENST00000420013 NR1H3Q13133 447 aa21.72■■□□□ 1.07
MCF2L-212ENST00000420013 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.72■■□□□ 1.07
MCF2L-212ENST00000420013 ARL14EPQ8N8R7 260 aaPredicted RBP21.72■■□□□ 1.07
MCF2L-212ENST00000420013 B3GALNT2Q8NCR0 500 aa21.72■■□□□ 1.07
MCF2L-212ENST00000420013 SH3RF2Q8TEC5 729 aa21.72■■□□□ 1.07
MCF2L-212ENST00000420013 SLC22A12Q96S37 553 aa21.72■■□□□ 1.07
MCF2L-212ENST00000420013 P2RY13Q9BPV8 354 aa21.72■■□□□ 1.07
MCF2L-212ENST00000420013 SERTAD1Q9UHV2 236 aa21.72■■□□□ 1.07
MCF2L-212ENST00000420013 C2orf78A6NCI8 922 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 A8MXQ7 604 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 F8VP50 259 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 PHACTR2O75167 634 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 PTPN1P18031 435 aaKnown RBP21.71■■□□□ 1.07
MCF2L-212ENST00000420013 HDCP19113 662 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 TGM1P22735 817 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 CLDN10P78369 228 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 DMWDQ09019 674 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 PKP1Q13835 747 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 RSPO4Q2I0M5 234 aaPredicted RBP21.71■■□□□ 1.07
MCF2L-212ENST00000420013 ZNF699Q32M78 642 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 EML3Q32P44 896 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 KIAA0895Q8NCT3 520 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 CCDC26Q8TAB7 109 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 PARD3BQ8TEW8 1205 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 ACDQ96AP0 544 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 CDV3Q9UKY7 258 aaKnown RBP21.71■■□□□ 1.07
MCF2L-212ENST00000420013 NME7Q9Y5B8 376 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 ATG2BQ96BY7 2078 aa21.71■■□□□ 1.07
MCF2L-212ENST00000420013 MYH10P35580 1976 aa21.7■■□□□ 1.07
MCF2L-212ENST00000420013 RNF40O75150 1001 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 OLFM2O95897 454 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 MYL6P60660 151 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 BIRC3Q13489 604 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 TDRD10Q5VZ19 366 aaKnown RBP21.7■■□□□ 1.06
MCF2L-212ENST00000420013 GRAMD1CQ8IYS0 662 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 PDZD8Q8NEN9 1154 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 OVCA2Q8WZ82 227 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 ZNF516Q92618 1163 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 CD101Q93033 1021 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 SLITRK1Q96PX8 696 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 PARD6AQ9NPB6 346 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 DMAC2Q9NW81 257 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 WNT6Q9Y6F9 365 aa21.7■■□□□ 1.06
MCF2L-212ENST00000420013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.69■■□□□ 1.06
MCF2L-212ENST00000420013 LRRIQ3A6PVS8 624 aaPredicted RBP21.69■■□□□ 1.06
MCF2L-212ENST00000420013 PDXKO00764 312 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 HRO43593 1189 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 AKAP3O75969 853 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 RTN3O95197 1032 aaPredicted RBP21.69■■□□□ 1.06
MCF2L-212ENST00000420013 KIF20AO95235 890 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 EGFP01133 1207 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 P4HA1P13674 534 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 PFKFB1P16118 471 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 CMA1P23946 247 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 USP46P62068 366 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 KRT85P78386 507 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 SLC7A9P82251 487 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 NCOA4Q13772 614 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 LPAL2Q16609 132 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 ZNF667Q5HYK9 610 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 HEATR6Q6AI08 1181 aaKnown RBP21.69■■□□□ 1.06
MCF2L-212ENST00000420013 PKN3Q6P5Z2 889 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 CEP68Q76N32 757 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 DDX42Q86XP3 938 aaKnown RBP eCLIP21.69■■□□□ 1.06
MCF2L-212ENST00000420013 CAMKK1Q8N5S9 505 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 PAGE5Q96GU1 130 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 TNIP3Q96KP6 325 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 CYP2S1Q96SQ9 504 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 KCTD10Q9H3F6 313 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 C2orf42Q9NWW7 574 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 NXF1Q9UBU9 619 aaKnown RBP21.69■■□□□ 1.06
MCF2L-212ENST00000420013 SLC8A2Q9UPR5 921 aa21.69■■□□□ 1.06
MCF2L-212ENST00000420013 ZNF840PA6NDX5 716 aa21.68■■□□□ 1.06
MCF2L-212ENST00000420013 OAS1P00973 400 aaKnown RBP21.68■■□□□ 1.06
MCF2L-212ENST00000420013 STK4Q13043 487 aa21.68■■□□□ 1.06
MCF2L-212ENST00000420013 KMT5BQ4FZB7 885 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms