RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SPATA18Q8TC71 538 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 ZSCAN31Q96LW9 406 aaPredicted RBP10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 AK8Q96MA6 479 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 IKZF4Q9H2S9 585 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 TMEM74BQ9NUR3 256 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 DDX43Q9NXZ2 648 aaKnown RBP10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 GTF3C4Q9UKN8 822 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 KLK13Q9UKR3 277 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 THADAQ6YHU6 1953 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 ANAPC1Q9H1A4 1944 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 CACNA1EQ15878 2313 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 SPAARA0A1B0GVQ0 90 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 GABRDO14764 452 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 HCRTO43612 131 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 TBCAO75347 108 aaKnown RBP10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 PPP1R37O75864 691 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 ALDH1A2O94788 518 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 CYP17A1P05093 508 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 PFKLP17858 780 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 HDCP19113 662 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 HOXD12P35452 270 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 MAGEA11P43364 429 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 MAPK8P45983 427 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 PDE6CP51160 858 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 MYL7Q01449 175 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 MESP2Q0VG99 397 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 MCM6Q14566 821 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 HSF5Q4G112 596 aaPredicted RBP10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 SPDYCQ5MJ68 293 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 SLC23A3Q6PIS1 610 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 OSTM1Q86WC4 334 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 SFTPA1Q8IWL2 248 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 C1orf127Q8N9H9 656 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 FSIP1Q8NA03 581 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 IL17RCQ8NAC3 791 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 WHAMMQ8TF30 809 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 RLN3Q8WXF3 142 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 SPACA7Q96KW9 195 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 NUSAP1Q9BXS6 441 aaKnown RBP10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 SLC32A1Q9H598 525 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 GDAP2Q9NXN4 497 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 MBD1Q9UIS9 605 aaPredicted RBP10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 CELSR3Q9NYQ7 3312 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 PLXND1Q9Y4D7 1925 aa10.94□□□□□ -0.66
TNFAIP3-202ENST00000420009 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 FAM221BA6H8Z2 402 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 SGK1O00141 431 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 LEFTY2O00292 366 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 HUS1O60921 280 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 OLFM2O95897 454 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 CAPNS1P04632 268 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 ITGB3P05106 788 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 PLCG1P19174 1290 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 PCSK1P29120 753 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 EIF2DP41214 584 aaKnown RBP10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 DPP6P42658 865 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 KIR2DL1P43626 348 aaPredicted RBP10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 SIM1P81133 766 aaPredicted RBP10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 TFAMQ00059 246 aaKnown RBP10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 DHX8Q14562 1220 aaKnown RBP10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 MAP7D1Q3KQU3 841 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 LMBRD2Q68DH5 695 aaPredicted RBP10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 SCARA3Q6AZY7 606 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 FAM171BQ6P995 826 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 ARMCX6Q7L4S7 300 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 SPATA2LQ8IUW3 424 aaPredicted RBP10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 BRSK2Q8IWQ3 736 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 TMEFF1Q8IYR6 380 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 ADGRF2Q8IZF7 708 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 ALLCQ8N6M5 410 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 TOP6BLQ8N6T0 577 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 FRMD1Q8N878 549 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 TXNDC5Q8NBS9 432 aaKnown RBP10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 POMGNT1Q8WZA1 660 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 RAD54LQ92698 747 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 HVCN1Q96D96 273 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 CALML4Q96GE6 196 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 SPATA17Q96L03 361 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 CEP295NLQ96MC4 621 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 STRA6Q9BX79 667 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 ZHX3Q9H4I2 956 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 PILRBQ9UKJ0 227 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 AGAP1Q9UPQ3 857 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 ANKRD11Q6UB99 2663 aaPredicted RBP10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 NBEAQ8NFP9 2946 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 ITPR1Q14643 2758 aa10.93□□□□□ -0.66
TNFAIP3-202ENST00000420009 PCDH15Q96QU1 1955 aa10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 ATXN2Q99700 1313 aaKnown RBP10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 A0A0A0MRY4 1105 aa10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 H0Y626 953 aa10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 TAF4O00268 1085 aa10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 ADAM23O75077 832 aa10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 KAT7O95251 611 aa10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 TRIM16O95361 564 aa10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 KLF8O95600 359 aaPredicted RBP10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 KRT18P05783 430 aaKnown RBP10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 UBA7P41226 1012 aa10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 LHX1P48742 406 aa10.92□□□□□ -0.66
TNFAIP3-202ENST00000420009 SLC7A9P82251 487 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms