RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PIK3R2O00459 728 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TM9SF1O15321 606 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 MAGEB2O15479 319 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 DIAPH2O60879 1101 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CD48P09326 243 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 GCAP28676 217 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 HIRAP54198 1017 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TNFAIP2Q03169 654 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 FNBP1LQ5T0N5 605 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 EEF1DP3Q658K8 133 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CGB2Q6NT52 195 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CCDC125Q86Z20 511 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 UBA3Q8TBC4 463 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 XYLT2Q9H1B5 865 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 NGRNQ9NPE2 291 aaKnown RBP12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PRMT7Q9NVM4 692 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 BTBD7Q9P203 1132 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 AKT3Q9Y243 479 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TCRBV5S1A1TA0A578 114 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PGK2P07205 417 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ZNF200P98182 395 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PTK7Q13308 1070 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ACAP1Q15027 740 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 RASA2Q15283 850 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 C1orf228Q6PIY5 440 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 DENND1AQ8TEH3 1009 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TTC17Q96AE7 1141 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TMEM237Q96Q45 408 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 RAB6BQ9NRW1 208 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 HBP1O60381 514 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 MICAL2O94851 1124 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ZBED1O96006 694 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 GPX6P59796 221 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 DPYSL3Q14195 570 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 FAM47CQ5HY64 1035 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 NLRP9Q7RTR0 991 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 XYLT1Q86Y38 959 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TRPM4Q8TD43 1214 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CFAP36Q96G28 342 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CDT1Q9H211 546 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SMYD3Q9H7B4 428 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 MANSC1Q9H8J5 431 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PPP2R3BQ9Y5P8 575 aa12.23□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 KIAA1217Q5T5P2 1943 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ERBB2P04626 1255 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 NFICP08651 508 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TXNP10599 105 aaKnown RBP12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 GPD1P21695 349 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 RAD23BP54727 409 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 GAD2Q05329 585 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 MGAT5Q09328 741 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 VGLL4Q14135 290 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 RGS9BPQ6ZS82 235 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 NAT8LQ8N9F0 302 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 HPDLQ96IR7 371 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 GPR20Q99678 358 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CNPY3Q9BT09 278 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PHACTR1Q9C0D0 580 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 FETUBQ9UGM5 382 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 C15orf41Q9Y2V0 281 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 A8MUI8 341 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CLUHO75153 1309 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CSDE1O75534 798 aaKnown RBP12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SPAG6O75602 509 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 GRAP2O75791 330 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 VDRP11473 427 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CCNB1P14635 433 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ELK3P41970 407 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SLC26A2P50443 739 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 BCAR1P56945 870 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ACCSLQ4AC99 568 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 OTOAQ7RTW8 1153 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PLPPR4Q7Z2D5 763 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TSSK1BQ9BXA7 367 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 KLC2Q9H0B6 622 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CHKBQ9Y259 395 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 LACTBL1A8MY62 500 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 KCNN4O15554 427 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TYROBPO43914 113 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 FAM189A1O60320 539 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 KRT37O76014 449 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 HMGCRP04035 888 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 OVGP1Q12889 678 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TAF1BQ53T94 588 aaPredicted RBP12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CELF3Q5SZQ8 465 aaKnown RBP12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CYP3A43Q9HB55 503 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SSU72Q9NP77 194 aaKnown RBP12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TNFSF13BQ9Y275 285 aa12.22□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 LOC102724159A0A0B4J2E5 919 aa12.21□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 I3L4J1 428 aa12.21□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TRUB2O95900 331 aaKnown RBP12.21□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SNX16P57768 344 aa12.21□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PWP2Q15269 919 aaKnown RBP12.21□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 MSS51Q4VC12 460 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms