RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 BCO2Q9BYV7 579 aa13.96□□□□□ -0.17
HLA-DMB-258ENST00000418107 UBN1Q9NPG3 1134 aa13.96□□□□□ -0.17
HLA-DMB-258ENST00000418107 CNTN6Q9UQ52 1028 aa13.96□□□□□ -0.17
HLA-DMB-258ENST00000418107 SNX9Q9Y5X1 595 aa13.96□□□□□ -0.17
HLA-DMB-258ENST00000418107 ANKRD62A6NC57 917 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 C2CD2LO14523 706 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 LILRB3O75022 631 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 PNPLA4P41247 253 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 TAF6P49848 677 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 CLEC16AQ2KHT3 1053 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 SV2CQ496J9 727 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 SMYD5Q6GMV2 418 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 PALB2Q86YC2 1186 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 DTWD2Q8NBA8 298 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 RSAD2Q8WXG1 361 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 DDX1Q92499 740 aaKnown RBP13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 RTP3Q9BQQ7 232 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 DNAI2Q9GZS0 605 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 RSAD1Q9HA92 442 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 MRPL17Q9NRX2 175 aaKnown RBP13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 TAS2R14Q9NYV8 317 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 NENFQ9UMX5 172 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 ATP8B3O60423 1300 aa13.96□□□□□ -0.18
HLA-DMB-258ENST00000418107 WDR87Q6ZQQ6 2873 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 EP300Q09472 2414 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 C2orf16Q68DN1 1984 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 ARL5CA6NH57 179 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 BTNL10A8MVZ5 291 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 PPEF2O14830 753 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 MED7O43513 233 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 POMCP01189 267 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 CFHP08603 1231 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 TMEM253P0C7T8 217 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 BRD2P25440 801 aaKnown RBP13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 ID4P47928 161 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 SCNN1GP51170 649 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 ZNF132P52740 706 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 GPC5P78333 572 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 ACAD10Q6JQN1 1059 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 ERMP1Q7Z2K6 904 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 PASD1Q8IV76 773 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 ZNF606Q8WXB4 792 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 HEXIM2Q96MH2 286 aaKnown RBP13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 FAM193BQ96PV7 902 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 PPP1R10Q96QC0 940 aaKnown RBP13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 SDCBP2Q9H190 292 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 ISCUQ9H1K1 167 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 GOLGA2P5Q9HBQ8 144 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 MAN1C1Q9NR34 630 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 CTTNBP2NLQ9P2B4 639 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 FAN1Q9Y2M0 1017 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 CEP83Q9Y592 693 aa13.95□□□□□ -0.18
HLA-DMB-258ENST00000418107 A0A0A6YYK5 440 aaPredicted RBP13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 ANO9A1A5B4 782 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 PIRO00625 290 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 PTGESO14684 152 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 RIOK3O14730 519 aaKnown RBP13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 NRP1O14786 923 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 HUS1O60921 280 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 ALDH2P05091 517 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 URODP06132 367 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 PAEPP09466 180 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 GBP2P32456 591 aaPredicted RBP13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 NSFP46459 744 aaKnown RBP13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 LIN9Q5TKA1 542 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 NAA35Q5VZE5 725 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 PPP1R2P3Q6NXS1 205 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 DPH6Q7L8W6 267 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 OLIG1Q8TAK6 271 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 CPA5Q8WXQ8 436 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 ZNF653Q96CK0 615 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 TMEM175Q9BSA9 504 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 THAP2Q9H0W7 228 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 SNX25Q9H3E2 840 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 MARCH5Q9NX47 278 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 IGSF9Q9P2J2 1179 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 STK39Q9UEW8 545 aa13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 PRG3Q9Y2Y8 225 aaPredicted RBP13.94□□□□□ -0.18
HLA-DMB-258ENST00000418107 CACNA1AO00555 2505 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 NCANO14594 1321 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 KRBA1A5PL33 1030 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 KPNA7A9QM74 516 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 STK25O00506 426 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 TEX28O15482 410 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 CILPO75339 1184 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 PALMO75781 387 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 SOD2P04179 222 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 NDST1P52848 882 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 RAD23BP54727 409 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 SOX4Q06945 474 aaPredicted RBP13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 ORC1Q13415 861 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 TUBB2AQ13885 445 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 RHOT2Q8IXI1 618 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 APPL2Q8NEU8 664 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 CMASQ8NFW8 434 aaPredicted RBP13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 SLC35G2Q8TBE7 412 aa13.93□□□□□ -0.18
HLA-DMB-258ENST00000418107 RFFLQ8WZ73 363 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms