RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 GIPC2Q8TF65 315 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 HDAC7Q8WUI4 952 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 SLC20A1Q8WUM9 679 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 TFAP2BQ92481 460 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 GOLGA1Q92805 767 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 SECISBP2LQ93073 1101 aaKnown RBP8.95□□□□□ -0.98
TRIM48-201ENST00000417545 ZNF512Q96ME7 567 aaPredicted RBP8.95□□□□□ -0.98
TRIM48-201ENST00000417545 PANX2Q96RD6 677 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 DNAJC7Q99615 494 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 DUSP16Q9BY84 665 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 SFXN1Q9H9B4 322 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 HSFX1Q9UBD0 423 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 PCDHGC3Q9UN70 934 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 HCFC2Q9Y5Z7 792 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 MTCH2Q9Y6C9 303 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 TRIOBPQ9H2D6 2365 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 MYO9BQ13459 2157 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 PATJQ8NI35 1801 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 FAM170AA1A519 330 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 TMCO5BA8MYB1 307 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 XPO1O14980 1071 aaKnown RBP8.94□□□□□ -0.98
TRIM48-201ENST00000417545 CCL16O15467 120 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 SOAT2O75908 522 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 RTN3O95197 1032 aaPredicted RBP8.94□□□□□ -0.98
TRIM48-201ENST00000417545 SEC24AO95486 1093 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 C1RP00736 705 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 CSH1P0DML2 217 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 CSH2P0DML3 217 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 LCP1P13796 627 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 TIE1P35590 1138 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 EIF4A3P38919 411 aaKnown RBP8.94□□□□□ -0.98
TRIM48-201ENST00000417545 PRKCIP41743 596 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 ACADSBP45954 432 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 RGS7P49802 495 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 PDE4CQ08493 712 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 HYAL1Q12794 435 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 MEA1Q16626 185 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 NAA35Q5VZE5 725 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 DENND1BQ6P3S1 775 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 CLEC20AQ6ZU45 233 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 DENND5BQ6ZUT9 1274 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 TTC30AQ86WT1 665 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 TTC9BQ8N6N2 239 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 EFHBQ8N7U6 833 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 TC2NQ8N9U0 490 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 CCDC112Q8NEF3 446 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 SPOCK2Q92563 424 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 CDX2Q99626 313 aaPredicted RBP8.94□□□□□ -0.98
TRIM48-201ENST00000417545 PKMYT1Q99640 499 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 BAG1Q99933 345 aaPredicted RBP8.94□□□□□ -0.98
TRIM48-201ENST00000417545 ZDHHC7Q9NXF8 308 aa8.94□□□□□ -0.98
TRIM48-201ENST00000417545 UXTQ9UBK9 157 aaPredicted RBP8.94□□□□□ -0.98
TRIM48-201ENST00000417545 NOCTQ9UK39 431 aaKnown RBP8.94□□□□□ -0.98
TRIM48-201ENST00000417545 SLC38A8A6NNN8 435 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 ZMYND10O75800 440 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 ABL1P00519 1130 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 HNRNPA1P09651 372 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRIM48-201ENST00000417545 DESP17661 470 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 GTF2F1P35269 517 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRIM48-201ENST00000417545 GPR15P49685 360 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 FMO1Q01740 532 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 ADGRE1Q14246 886 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 SPA17Q15506 151 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 RARS2Q5T160 578 aaKnown RBP8.93□□□□□ -0.98
TRIM48-201ENST00000417545 SDHAF4Q5VUM1 108 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 CES5AQ6NT32 575 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 RTL10Q7L3V2 364 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 ZNF571Q7Z3V5 609 aaPredicted RBP8.93□□□□□ -0.98
TRIM48-201ENST00000417545 IRF2BP2Q7Z5L9 587 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 ERICH1Q86X53 443 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 TMTC1Q8IUR5 882 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 NUP93Q8N1F7 819 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 TXLNBQ8N3L3 684 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 GPR152Q8TDT2 470 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 SLC22A17Q8WUG5 538 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 SMG7Q92540 1137 aaKnown RBP8.93□□□□□ -0.98
TRIM48-201ENST00000417545 FBXO32Q969P5 355 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 TRIM11Q96F44 468 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 PPP1R13BQ96KQ4 1090 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 C8orf48Q96LL4 319 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 SLITRK1Q96PX8 696 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 SMOQ99835 787 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 APOL5Q9BWW9 433 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 LHX5Q9H2C1 402 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 FBXO44Q9H4M3 255 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 NHEJ1Q9H9Q4 299 aaPredicted RBP8.93□□□□□ -0.98
TRIM48-201ENST00000417545 ASAH2Q9NR71 780 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 ASB3Q9Y575 518 aa8.93□□□□□ -0.98
TRIM48-201ENST00000417545 CCDC195A0A1B0GUA6 201 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 SSU72P8A0A1W2PR75 194 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 ANKRD62A6NC57 917 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 PIK3R2O00459 728 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 FGF19O95750 216 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 CALB1P05937 261 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 PLEKP08567 350 aaPredicted RBP8.92□□□□□ -0.98
TRIM48-201ENST00000417545 MYL4P12829 197 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 HOXA9P31269 272 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 HNRNPH3P31942 346 aaKnown RBP8.92□□□□□ -0.98
TRIM48-201ENST00000417545 PLA2G4AP47712 749 aa8.92□□□□□ -0.98
TRIM48-201ENST00000417545 TKTL1P51854 596 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms