RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SLC18A1P54219 525 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 YWHAEP62258 255 aaKnown RBP15.16■□□□□ 0.02
HDAC9-208ENST00000417496 TAP1Q03518 808 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 NCAPG2Q86XI2 1143 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 CCDC125Q86Z20 511 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 DNERQ8NFT8 737 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 PIWIL1Q96J94 861 aaKnown RBP15.16■□□□□ 0.02
HDAC9-208ENST00000417496 PEBP4Q96S96 227 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 ACSS3Q9H6R3 686 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 CYLDQ9NQC7 956 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 SIX4Q9UIU6 781 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 PARP14Q460N5 1801 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 A0A1B0GUA9 196 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 SKAP2O75563 359 aaPredicted RBP15.16■□□□□ 0.02
HDAC9-208ENST00000417496 PGK2P07205 417 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 NFICP08651 508 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 PHBP35232 272 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 EFNA5P52803 228 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 AP3M2P53677 418 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 DPYSL3Q14195 570 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 HADHQ16836 314 aaKnown RBP15.16■□□□□ 0.02
HDAC9-208ENST00000417496 CDO1Q16878 200 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 ANKRD20A2Q5SQ80 823 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 ANKRD20A1Q5TYW2 823 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 ZNF772Q68DY9 489 aaPredicted RBP15.16■□□□□ 0.02
HDAC9-208ENST00000417496 PDIK1LQ8N165 341 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 SEPT1Q8WYJ6 367 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 MIEF2Q96C03 454 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 PRR11Q96HE9 360 aaPredicted RBP15.16■□□□□ 0.02
HDAC9-208ENST00000417496 SERAC1Q96JX3 654 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 STRIP2Q9ULQ0 834 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 USP18Q9UMW8 372 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 PHIPQ8WWQ0 1821 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 ENTPD5O75356 428 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 DCTN3O75935 186 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 KBTBD12Q3ZCT8 623 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 DALRD3Q5D0E6 543 aaKnown RBP15.15■□□□□ 0.02
HDAC9-208ENST00000417496 DEFB132Q7Z7B7 95 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 PCGF5Q86SE9 256 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 BANPQ8N9N5 519 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 TTC8Q8TAM2 541 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 TRPM4Q8TD43 1214 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 KCNN1Q92952 543 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 RAB3IPQ96QF0 476 aaPredicted RBP15.15■□□□□ 0.02
HDAC9-208ENST00000417496 ZFP69BQ9UJL9 534 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 TNNC2P02585 160 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 POLR2BP30876 1174 aaKnown RBP15.15■□□□□ 0.02
HDAC9-208ENST00000417496 CLCN3P51790 818 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 C15orf59Q2T9L4 293 aaPredicted RBP15.15■□□□□ 0.02
HDAC9-208ENST00000417496 FAXCQ5TGI0 409 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 ATF7IP2Q5U623 682 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 C1orf228Q6PIY5 440 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 AGGF1Q8N302 714 aaeCLIP15.15■□□□□ 0.02
HDAC9-208ENST00000417496 C1orf127Q8N9H9 656 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 DHRS4Q9BTZ2 278 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 ELOVL4Q9GZR5 314 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 MANSC1Q9H8J5 431 aa15.15■□□□□ 0.02
HDAC9-208ENST00000417496 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.15■□□□□ 0.02
HDAC9-208ENST00000417496 TCRBV9S1A1TA0A576 114 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 KBTBD13C9JR72 458 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 ZWINTO95229 277 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 ITGB3P05106 788 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 FAAP100Q0VG06 881 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 FAM102AQ5T9C2 384 aaPredicted RBP15.14■□□□□ 0.01
HDAC9-208ENST00000417496 FAM160B1Q5W0V3 765 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 TRNP1Q6NT89 227 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 DARS2Q6PI48 645 aaKnown RBP15.14■□□□□ 0.01
HDAC9-208ENST00000417496 CLNKQ7Z7G1 428 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 PRPF39Q86UA1 669 aaKnown RBP15.14■□□□□ 0.01
HDAC9-208ENST00000417496 SLC4A11Q8NBS3 891 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 TTC17Q96AE7 1141 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 ANKRD36BP1Q96IX9 119 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 FAM111AQ96PZ2 611 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 FBXO6Q9NRD1 293 aaPredicted RBP15.14■□□□□ 0.01
HDAC9-208ENST00000417496 SLC5A4Q9NY91 659 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 SUFUQ9UMX1 484 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 CFAP69A5D8W1 941 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 M0QYV0 167 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 MICAL2O94851 1124 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 CDH6P55285 790 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 YWHAGP61981 247 aaKnown RBP eCLIP15.14■□□□□ 0.01
HDAC9-208ENST00000417496 ZNF667Q5HYK9 610 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 IER5Q5VY09 327 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 CDCA2Q69YH5 1023 aaPredicted RBP15.14■□□□□ 0.01
HDAC9-208ENST00000417496 MPZL3Q6UWV2 235 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 ZBTB8OSQ8IWT0 167 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 CCDC33Q8N5R6 958 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 COPS5Q92905 334 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 TRIM56Q9BRZ2 755 aaKnown RBP15.14■□□□□ 0.01
HDAC9-208ENST00000417496 PTPRHQ9HD43 1115 aa15.14■□□□□ 0.01
HDAC9-208ENST00000417496 E7ESA3 106 aa15.13■□□□□ 0.01
HDAC9-208ENST00000417496 APOC4-APOC2K7ER74 178 aa15.13■□□□□ 0.01
HDAC9-208ENST00000417496 GPR25O00155 361 aa15.13■□□□□ 0.01
HDAC9-208ENST00000417496 LPXNO60711 386 aa15.13■□□□□ 0.01
HDAC9-208ENST00000417496 UPP2O95045 317 aa15.13■□□□□ 0.01
HDAC9-208ENST00000417496 ZBTB7AO95365 584 aa15.13■□□□□ 0.01
HDAC9-208ENST00000417496 TRUB2O95900 331 aaKnown RBP15.13■□□□□ 0.01
HDAC9-208ENST00000417496 APOC2P02655 101 aa15.13■□□□□ 0.01
HDAC9-208ENST00000417496 MT-ND3P03897 115 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms