RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 IGSF9Q9P2J2 1179 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 HESX1Q9UBX0 185 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 DNAJC12Q9UKB3 198 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 CNTN6Q9UQ52 1028 aa24.46■■□□□ 1.51
SMARCB1-205ENST00000417137 LGALS16A8MUM7 142 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 ATP1A3P13637 1013 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 RFX1P22670 979 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 UBXN1Q04323 297 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 STILQ15468 1287 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 TEAD2Q15562 447 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 ARHGAP44Q17R89 818 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 FILIP1LQ4L180 1135 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 GJB7Q6PEY0 223 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 MTSS1LQ765P7 747 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 LSM14BQ9BX40 385 aaKnown RBP24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 SLITRK6Q9H5Y7 841 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 IL21Q9HBE4 155 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 SIX2Q9NPC8 291 aa24.45■■□□□ 1.5
SMARCB1-205ENST00000417137 SOBPA7XYQ1 873 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 MOSPD3O75425 235 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 F11P03951 625 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 GJA1P17302 382 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 NPR3P17342 541 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 PPP3CCP48454 512 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 KLHDC7AQ5VTJ3 777 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 LRSAM1Q6UWE0 723 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 LUZP1Q86V48 1076 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 ANKRD52Q8NB46 1076 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 STKLD1Q8NE28 680 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 MRPS31Q92665 395 aaKnown RBP24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 TTLL2Q9BWV7 592 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 TSPY26PQ9H489 355 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 PNPLA8Q9NP80 782 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 PLCB1Q9NQ66 1216 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 TMEM30AQ9NV96 361 aa24.44■■□□□ 1.5
SMARCB1-205ENST00000417137 RNF225M0QZC1 329 aaPredicted RBP24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 DDX6P26196 483 aaKnown RBP eCLIP24.43■■□□□ 1.59e-7■■■■■ 33.4
SMARCB1-205ENST00000417137 YWHAQP27348 245 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 USP8P40818 1118 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 APBA1Q02410 837 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 CNGA2Q16280 664 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 CLEC20AQ6ZU45 233 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 SHC3Q92529 594 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 PCMTD1Q96MG8 357 aaPredicted RBP24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 SLITRK1Q96PX8 696 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 UBXN6Q9BZV1 441 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 FBXO44Q9H4M3 255 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 TASP1Q9H6P5 420 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 KCNK12Q9HB15 430 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 DAAM1Q9Y4D1 1078 aa24.43■■□□□ 1.5
SMARCB1-205ENST00000417137 ANHXE9PGG2 379 aa24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 BEST1O76090 585 aa24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 PLA2G5P39877 138 aa24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 ZNF132P52740 706 aa24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 GPR158Q5T848 1215 aa24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 APTXQ7Z2E3 356 aaKnown RBP24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 ZMIZ2Q8NF64 920 aa24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 TRPM5Q9NZQ8 1165 aa24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 RAPGEFL1Q9UHV5 662 aa24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 TSPAN16Q9UKR8 245 aa24.42■■□□□ 1.5
SMARCB1-205ENST00000417137 DENND4AQ7Z401 1863 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 TNFRSF10BO14763 440 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 MED7O43513 233 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 SERPINC1P01008 464 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 UCHL3P15374 230 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 SLC5A3P53794 718 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 BCAT1P54687 386 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 GOLGA7BQ2TAP0 167 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 LCLAT1Q6UWP7 414 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 PDZD8Q8NEN9 1154 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 OVCA2Q8WZ82 227 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 SMARCD2Q92925 531 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 FAM122AQ96E09 287 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 ERGIC2Q96RQ1 377 aa24.41■■□□□ 1.5
SMARCB1-205ENST00000417137 O00370 1275 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 ALADP13716 330 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 USP46P62068 366 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 CYP4F8P98187 520 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 BST2Q10589 180 aaKnown RBP24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 IFRD2Q12894 506 aaPredicted RBP24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 TAF10Q12962 218 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 RAPGEF1Q13905 1077 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 SYCP1Q15431 976 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 PTPN21Q16825 1174 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 DPY19L2P1Q6NXN4 242 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 TMEM150AQ86TG1 271 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 ZSCAN18Q8TBC5 510 aaPredicted RBP24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 TFAP2BQ92481 460 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 FBXO32Q969P5 355 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 E2F7Q96AV8 911 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 ZSWIM3Q96MP5 696 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 STK33Q9BYT3 514 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 ZFP14Q9HCL3 533 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 IL37Q9NZH6 218 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 SORCS3Q9UPU3 1222 aa24.4■■□□□ 1.5
SMARCB1-205ENST00000417137 FOXN3O00409 490 aaPredicted RBP24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 ASGR2P07307 311 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 BRD2P25440 801 aaKnown RBP24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 WEE1P30291 646 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 BPIFB4P59827 614 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms