RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 TTLL2Q9BWV7 592 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 GREB1Q4ZG55 1949 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 TACC1O75410 805 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 DLATP10515 647 aaKnown RBP15.82■□□□□ 0.12
RPS28-201ENST00000417088 PFKLP17858 780 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 GNL1P36915 607 aaPredicted RBP15.82■□□□□ 0.12
RPS28-201ENST00000417088 AMPD3Q01432 767 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 NR1H3Q13133 447 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 DMC1Q14565 340 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 PSMD6Q15008 389 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 PLK5Q496M5 336 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 AASDHQ4L235 1098 aaPredicted RBP15.82■□□□□ 0.12
RPS28-201ENST00000417088 MDH1BQ5I0G3 518 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 PLA2G2CQ5R387 149 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 FAM26FQ5R3K3 315 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 SHC4Q6S5L8 630 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 DENND5BQ6ZUT9 1274 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 IQUBQ8NA54 791 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 C7orf25Q9BPX7 421 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 RXFP3Q9NSD7 469 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 TRPM5Q9NZQ8 1165 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 CHD8Q9HCK8 2581 aa15.82■□□□□ 0.12
RPS28-201ENST00000417088 ZNF840PA6NDX5 716 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 F8VP50 259 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 K7ELQ4 463 aaPredicted RBP15.81■□□□□ 0.12
RPS28-201ENST00000417088 LEFTY2O00292 366 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 TRIM66O15016 1216 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 CLIC2O15247 247 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 FAM163BP0C2L3 166 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 TNNI1P19237 187 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 ANXA13P27216 316 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 OPRD1P41143 372 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 PDE6CP51160 858 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 CYP2J2P51589 502 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 LIMK1P53667 647 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 CYP24A1Q07973 514 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 EHHADHQ08426 723 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 PSMD2Q13200 908 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 NELFCDQ8IXH7 590 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 C12orf50Q8NA57 414 aaPredicted RBP15.81■□□□□ 0.12
RPS28-201ENST00000417088 OR6B3Q8NGW1 331 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 SCFD1Q8WVM8 642 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 ZNF516Q92618 1163 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 ACDQ96AP0 544 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 CCDC127Q96BQ5 260 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 C8orf48Q96LL4 319 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 ZNF396Q96N95 335 aaPredicted RBP15.81■□□□□ 0.12
RPS28-201ENST00000417088 CGRRF1Q99675 332 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 RNF38Q9H0F5 515 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 GZF1Q9H116 711 aaPredicted RBP15.81■□□□□ 0.12
RPS28-201ENST00000417088 DUSP15Q9H1R2 295 aaPredicted RBP15.81■□□□□ 0.12
RPS28-201ENST00000417088 SNX25Q9H3E2 840 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 SMOC1Q9H4F8 434 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 TMEM30AQ9NV96 361 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 EBF1Q9UH73 591 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 PCDHGA5Q9Y5G8 931 aa15.81■□□□□ 0.12
RPS28-201ENST00000417088 EML5Q05BV3 1969 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 TM4SF5O14894 197 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 DCLK1O15075 740 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 CUTAO60888 179 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 YEATS4O95619 227 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 NFATC1O95644 943 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 APBB3O95704 486 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
RPS28-201ENST00000417088 CACNA2D1P54289 1103 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 SNRPFP62306 86 aaKnown RBP15.8■□□□□ 0.12
RPS28-201ENST00000417088 NOP14P78316 857 aaKnown RBP15.8■□□□□ 0.12
RPS28-201ENST00000417088 SLC7A9P82251 487 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 GAB4Q2WGN9 574 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 WDR72Q3MJ13 1102 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 IL31Q6EBC2 164 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 UNC13DQ70J99 1090 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 HS2ST1Q7LGA3 356 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 XXYLT1Q8NBI6 393 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 DDX1Q92499 740 aaKnown RBP15.8■□□□□ 0.12
RPS28-201ENST00000417088 FNBP1Q96RU3 617 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 EHD2Q9NZN4 543 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 PTPRDP23468 1912 aa15.8■□□□□ 0.12
RPS28-201ENST00000417088 UBE4BO95155 1302 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 ANTXRLA6NF34 631 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 K7EQS6 105 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 STAU1O95793 577 aaKnown RBP15.79■□□□□ 0.12
RPS28-201ENST00000417088 OLFM2O95897 454 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 CASP1P29466 404 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 MPLP40238 635 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 PPP3CCP48454 512 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 MYL6P60660 151 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 TNNC1P63316 161 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 TAF10Q12962 218 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 FILIP1Q7Z7B0 1213 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 ADGRG2Q8IZP9 1017 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 USP33Q8TEY7 942 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 ZNF518BQ9C0D4 1074 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 XYLT2Q9H1B5 865 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 BLZF1Q9H2G9 400 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 DPEP3Q9H4B8 488 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 VPS45Q9NRW7 570 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 CPQQ9Y646 472 aa15.79■□□□□ 0.12
RPS28-201ENST00000417088 A8MXQ7 604 aa15.78■□□□□ 0.12
RPS28-201ENST00000417088 CLDN5O00501 218 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms